Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2636 ATGGGAAACAGTGAGGAAGATAAATCTACTAAGACTGAAAAACCTTCTTCACCTGTAGCAATGGATCAGGCCAACCAGACCAATATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCAAAGAGTCACCATGCCACCATACTACAACTCGGCTGTGGCCTCTGGTCATGCTCCTCACCCGTACATGTGGGGGCCACCACAGGTAGTACCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATCCACATGGAGGAGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATACACATAGTCAAGGAGTTCCGTCTTCACCTGCTGCAGGGACTCCTTTAAGCATCGAGACACCACCCAAATCATCTGGAAATACTGATCAGGGTCTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCAATAGGCAATGGCCATGCTGAAAGTGCAGAGCGTGGAGTGTGGATACTGAGGGTACCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGAGTAGGATATCAATGAACTTTGTGTTGATGGTTGTTCTTTTCTTCACTGTACAAGCAGATGGAGAAGGGAAAACCGAGATACAAGGCAGTCCAGTTTCCAAAGAGACTGCAGCTTCTAAAAAGATGTTGATAGTTGGCCCTGCCAGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAAAAACAAATACCCCAAGTGCCCAACAACCTTGTCCAGCATTACCTGCAGAAACTTGGTTACAGAATGAGCGTGAGCTGAAACGTGAGAGGCGGAAACAATCAAATCGGGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAAGCTGAAGAACTGTCACAAAAAGTTGAATCCTTGAATGCTGAGAATGCGACACTGAAATCAGAGATAAATCGATTGACTGAATGTTCTGAAAAAATGAGGGTGGAAAATGCTACAATAAGGGAAAAACTTAAAAATGCTCAACTGGGACAAACACAAGAGATAACTTTGAACATAATTGAAAGCCAGAGGGCTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATAATAATAATTCCGGTTCTAATGATAGAACTGTGGAGGATGAGAATGGTTTTTGTGAAAATAAACCAAGCTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1275 0.4416 MGNSEEDKSTKTEKPSSPVAMDQANQTNIHVYPDWAAMQAYYGQRVTMPPYYNSAVASGHAPHPYMWGPPQVVPMMPPYGPPYAAIYPHGGVYTHPAVPIGPHTHSQGVPSSPAAGTPLSIETPPKSSGNTDQGLMKKLKEFDGLAMSIGNGHAESAERGVWILRVPVMEVMATLQGLIKQEGKEAVREHQPLSRISMNFVLMVVLFFTVQADGEGKTEIQGSPVSKETAASKKMLIVGPASVAGTIVGPVVSSKTNTPSAQQPCPALPAETWLQNERELKRERRKQSNRESARRSRLRKQAEAEELSQKVESLNAENATLKSEINRLTECSEKMRVENATIREKLKNAQLGQTQEITLNIIESQRATPVSTENLLSRVNNNNSGSNDRTVEDENGFCENKPSSGAKLHQLLDTSPRADAVAAG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2636 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Aed2g2636 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 424 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aed2g2636 424 MobiDBLite consensus disorder prediction 105 132 - -
Aed2g2636 424 Pfam bZIP transcription factor 277 339 IPR004827 GO:0003700|GO:0006355
Aed2g2636 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Aed2g2636 424 Gene3D - 280 336 - -
Aed2g2636 424 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Aed2g2636 424 PANTHER G-BOX-BINDING FACTOR 3 1 424 - -
Aed2g2636 424 MobiDBLite consensus disorder prediction 1 24 - -
Aed2g2636 424 MobiDBLite consensus disorder prediction 279 307 - -
Aed2g2636 424 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Aed2g2636 424 MobiDBLite consensus disorder prediction 279 310 - -
Aed2g2636 424 MobiDBLite consensus disorder prediction 377 391 - -
Aed2g2636 424 MobiDBLite consensus disorder prediction 377 424 - -
Aed2g2636 424 SUPERFAMILY Leucine zipper domain 280 335 IPR046347 GO:0003700|GO:0006355
Aed2g2636 424 MobiDBLite consensus disorder prediction 101 132 - -
Aed2g2636 424 Coils Coil 290 331 - -
Aed2g2636 424 CDD bZIP_plant_GBF1 282 330 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2636 Aed-Chr2 28607237 28613613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2636 276 424 bZIP Transcription Factor Family AT2G46270 54.362 1.11e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed2g2636 MFMR 9.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2636 K09060 - gmx:100781875 625.165