Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2625 ATGAATTGTTTTCCGTGTTTTTCAAAGACTAAGAGAAGCAACAGCAAGAGGGAGCACCAAGGGAGTACTATTCCACTGGAAAACGTTAACGTAACAAAAACAACACCGCCGGCAGATGTAAAGAAGCAAAAGGCAGATGATCCAAACCAAGTTGACACTTCAAATATTCAAGCACAAAATTTCACATTCCGTGAGCTGGCAATTGCAACAAAGAATTTCCGCCAAGAATGCTTGTTGGGTGAAGGGGGCTTCGGCAGAGTTTATAAGGGAACAATTCCTGCAACCGGGCAGGTGGTAGCAGTGAAGCAACTCGACCGAAATGGGGTCCAAGGCAGTAAGGAATTTCTGGTTGAGGTTTTGATGTTAAGTCTCTTGAACCATGAGAATCTGGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTCTATGAGTTCATGCCAGCGGGCTGTTTAGAAGACCGTCTTCTTGAGAGGAAACCAGATGAACCTGCATTAGATTGGTACAACAGAATGAAAATAGCATCAAATGCGGCGAAAGGACTATGGTACTTGCACGACATGGCGAATCCTTCAGTTATATTCCGGGACTTGAAATCCGCAAACATCTTGCTGGACAATGATCACAATGCAAAACTATCTGATTATGGACTGGCCAAACTCGCTGGTAAAGATAAGATGAACGCACAACCCATATTCAGGGACCCTAAAAGATATCCAGACATGGCAGATCCAAATCTACAAAAAAATTTCCCAGAAAAGGATCTGAACCAAGTTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAAGCAGCAGCGCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTTTCCACCACTCCTCCTGCACCTGCAGAGGTTGTTCCTGATGCCAAGACTGCTGCTGCACCTGAAAATGAAGCAGGATCTAGAAAGGGCGGCGATGGCTCCTCCTCCTCTGATGAAGATGATTATTATGAGAATGAAAACCATCACAATTTCAGTCCACAAGACATGAAAGAGACCAATGAGTTTTACTCCAAATCAAGCCGCAAGAATAGCACCAGATCAAAGAGTGGAACCGTTTCTTCTAGCCAGAGAAGCTCCAGTTCATATTCAGATTCAGAGAACGAGAGCGTCTCAACCAGCCACAAAAGAAGCAGCAGAAAGAACAAGTCTTCTTTAAGCAAGAAGAGCAGTAAGAAATCTTCAGTGAGAGTCTTAAGCCACAGGAGAAGTGGATCCAATACAAGCCACAGTAGCAGCAGTGGGGTGTCACAAAATGGTGGTAATCTTTATGAGCGTAGCGGAAGCAGGCCATCAGAAGGGAACGTTTCAATTGGCCTAATCAGCAGTGAGAACTCAGACGACAGTGACAACAGCCAAAGGTCACGGGAAAGGAGCAGCATGCATTTAGATTCGGAGGAGACAAATGTTTATTACCAATAG 1467 0.4458 MNCFPCFSKTKRSNSKREHQGSTIPLENVNVTKTTPPADVKKQKADDPNQVDTSNIQAQNFTFRELAIATKNFRQECLLGEGGFGRVYKGTIPATGQVVAVKQLDRNGVQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMPAGCLEDRLLERKPDEPALDWYNRMKIASNAAKGLWYLHDMANPSVIFRDLKSANILLDNDHNAKLSDYGLAKLAGKDKMNAQPIFRDPKRYPDMADPNLQKNFPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTTPPAPAEVVPDAKTAAAPENEAGSRKGGDGSSSSDEDDYYENENHHNFSPQDMKETNEFYSKSSRKNSTRSKSGTVSSSQRSSSSYSDSENESVSTSHKRSSRKNKSSLSKKSSKKSSVRVLSHRRSGSNTSHSSSSGVSQNGGNLYERSGSRPSEGNVSIGLISSENSDDSDNSQRSRERSSMHLDSEETNVYYQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2625 488 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Aed2g2625 488 PANTHER OS07G0668900 PROTEIN 1 231 - -
Aed2g2625 488 SMART serkin_6 73 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2625 488 Gene3D Phosphorylase Kinase; domain 1 34 149 - -
Aed2g2625 488 Gene3D Transferase(Phosphotransferase) domain 1 150 231 - -
Aed2g2625 488 ProSiteProfiles Protein kinase domain profile. 73 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2625 488 Pfam Protein kinase domain 75 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2625 488 MobiDBLite consensus disorder prediction 464 479 - -
Aed2g2625 488 Gene3D Transferase(Phosphotransferase) domain 1 232 296 - -
Aed2g2625 488 MobiDBLite consensus disorder prediction 415 463 - -
Aed2g2625 488 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 231 - -
Aed2g2625 488 PANTHER RECEPTOR KINASE-LIKE PROTEIN 232 328 - -
Aed2g2625 488 MobiDBLite consensus disorder prediction 19 37 - -
Aed2g2625 488 MobiDBLite consensus disorder prediction 392 414 - -
Aed2g2625 488 MobiDBLite consensus disorder prediction 293 488 - -
Aed2g2625 488 SUPERFAMILY Protein kinase-like (PK-like) 59 301 IPR011009 -
Aed2g2625 488 MobiDBLite consensus disorder prediction 1 51 - -
Aed2g2625 488 PANTHER OS07G0668900 PROTEIN 232 328 - -
Aed2g2625 488 MobiDBLite consensus disorder prediction 322 344 - -
Aed2g2625 488 MobiDBLite consensus disorder prediction 345 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2625 Aed-Chr2 28545059 28548601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2625 1 294 Glycoside Hydrolase AT3G07070 50.833 3.05e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aed2g2625 Pkinase 3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2625 - - gmx:100807682 431.024