Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed2g2625 | ATGAATTGTTTTCCGTGTTTTTCAAAGACTAAGAGAAGCAACAGCAAGAGGGAGCACCAAGGGAGTACTATTCCACTGGAAAACGTTAACGTAACAAAAACAACACCGCCGGCAGATGTAAAGAAGCAAAAGGCAGATGATCCAAACCAAGTTGACACTTCAAATATTCAAGCACAAAATTTCACATTCCGTGAGCTGGCAATTGCAACAAAGAATTTCCGCCAAGAATGCTTGTTGGGTGAAGGGGGCTTCGGCAGAGTTTATAAGGGAACAATTCCTGCAACCGGGCAGGTGGTAGCAGTGAAGCAACTCGACCGAAATGGGGTCCAAGGCAGTAAGGAATTTCTGGTTGAGGTTTTGATGTTAAGTCTCTTGAACCATGAGAATCTGGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTCTATGAGTTCATGCCAGCGGGCTGTTTAGAAGACCGTCTTCTTGAGAGGAAACCAGATGAACCTGCATTAGATTGGTACAACAGAATGAAAATAGCATCAAATGCGGCGAAAGGACTATGGTACTTGCACGACATGGCGAATCCTTCAGTTATATTCCGGGACTTGAAATCCGCAAACATCTTGCTGGACAATGATCACAATGCAAAACTATCTGATTATGGACTGGCCAAACTCGCTGGTAAAGATAAGATGAACGCACAACCCATATTCAGGGACCCTAAAAGATATCCAGACATGGCAGATCCAAATCTACAAAAAAATTTCCCAGAAAAGGATCTGAACCAAGTTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAAGCAGCAGCGCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTTTCCACCACTCCTCCTGCACCTGCAGAGGTTGTTCCTGATGCCAAGACTGCTGCTGCACCTGAAAATGAAGCAGGATCTAGAAAGGGCGGCGATGGCTCCTCCTCCTCTGATGAAGATGATTATTATGAGAATGAAAACCATCACAATTTCAGTCCACAAGACATGAAAGAGACCAATGAGTTTTACTCCAAATCAAGCCGCAAGAATAGCACCAGATCAAAGAGTGGAACCGTTTCTTCTAGCCAGAGAAGCTCCAGTTCATATTCAGATTCAGAGAACGAGAGCGTCTCAACCAGCCACAAAAGAAGCAGCAGAAAGAACAAGTCTTCTTTAAGCAAGAAGAGCAGTAAGAAATCTTCAGTGAGAGTCTTAAGCCACAGGAGAAGTGGATCCAATACAAGCCACAGTAGCAGCAGTGGGGTGTCACAAAATGGTGGTAATCTTTATGAGCGTAGCGGAAGCAGGCCATCAGAAGGGAACGTTTCAATTGGCCTAATCAGCAGTGAGAACTCAGACGACAGTGACAACAGCCAAAGGTCACGGGAAAGGAGCAGCATGCATTTAGATTCGGAGGAGACAAATGTTTATTACCAATAG | 1467 | 0.4458 | MNCFPCFSKTKRSNSKREHQGSTIPLENVNVTKTTPPADVKKQKADDPNQVDTSNIQAQNFTFRELAIATKNFRQECLLGEGGFGRVYKGTIPATGQVVAVKQLDRNGVQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMPAGCLEDRLLERKPDEPALDWYNRMKIASNAAKGLWYLHDMANPSVIFRDLKSANILLDNDHNAKLSDYGLAKLAGKDKMNAQPIFRDPKRYPDMADPNLQKNFPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTTPPAPAEVVPDAKTAAAPENEAGSRKGGDGSSSSDEDDYYENENHHNFSPQDMKETNEFYSKSSRKNSTRSKSGTVSSSQRSSSSYSDSENESVSTSHKRSSRKNKSSLSKKSSKKSSVRVLSHRRSGSNTSHSSSSGVSQNGGNLYERSGSRPSEGNVSIGLISSENSDDSDNSQRSRERSSMHLDSEETNVYYQ | 488 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed2g2625 | 488 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 102 | IPR017441 | GO:0005524 | |
Aed2g2625 | 488 | PANTHER | OS07G0668900 PROTEIN | 1 | 231 | - | - | |
Aed2g2625 | 488 | SMART | serkin_6 | 73 | 290 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed2g2625 | 488 | Gene3D | Phosphorylase Kinase; domain 1 | 34 | 149 | - | - | |
Aed2g2625 | 488 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 231 | - | - | |
Aed2g2625 | 488 | ProSiteProfiles | Protein kinase domain profile. | 73 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed2g2625 | 488 | Pfam | Protein kinase domain | 75 | 229 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 464 | 479 | - | - | |
Aed2g2625 | 488 | Gene3D | Transferase(Phosphotransferase) domain 1 | 232 | 296 | - | - | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 415 | 463 | - | - | |
Aed2g2625 | 488 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN | 1 | 231 | - | - | |
Aed2g2625 | 488 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN | 232 | 328 | - | - | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 19 | 37 | - | - | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 392 | 414 | - | - | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 293 | 488 | - | - | |
Aed2g2625 | 488 | SUPERFAMILY | Protein kinase-like (PK-like) | 59 | 301 | IPR011009 | - | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Aed2g2625 | 488 | PANTHER | OS07G0668900 PROTEIN | 232 | 328 | - | - | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 322 | 344 | - | - | |
Aed2g2625 | 488 | MobiDBLite | consensus disorder prediction | 345 | 384 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed2g2625 | Aed-Chr2 | 28545059 | 28548601 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed2g2625 | 1 | 294 | Glycoside Hydrolase | AT3G07070 | 50.833 | 3.05e-113 | 339 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Aed2g2625 | Pkinase | 3e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed2g2625 | - | - | gmx:100807682 | 431.024 |