Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2624 ATGATGGTGTTCGTGTGGACTGCAAACAGACCCGTCACTGCAACCACAACAGACACGTCGACGCTCTCAATTTCCTTCCTTGCAAATGGACTCAATATTCCAAAGTCCAATTCCTTCTGTCAAGGCCCACTTCGTGCATGCTTGTTGACGTTCAACATGTCCCAATATGTGTCATTTGGTGAGTGCGGTGATGTGAATGAGGATATAGACATGTGGGGTAACGATGGGTTTCCGACCACCTTGTGCTGTCGAAATGCTCTCACGGTTATGTCGAATGCGTTGGCCTCGCTAGCCATTAAGCTTTTCGTAGGAAGACACGTGTTCCTTTCCCAAGATGAAACGCAGAGTTGTGCCCAGTCGTTTCACCCGCAGCAAGGGATGTCGTTTAATTCATGTGGCTTTCAAAGCTTGTACATCGGCAGTTCCAAATGCTCCGACATATATTTGCAGGATGTTACGAAATTGCAACAGTACCAGGATGCATTGGACAAATGCTCTCACTTCGACCACCCATTTGATCAATCTTGTGCAGATTGCACCGCTGCAATTTTGAGCGTGAGAGATACTTTAGTACTTCAAGTGGCCAACAACAACAACTACACTGAGGTAGCCATATGTGGGGTAGCAGCTATTGTCGCTGTTGCAACTGGGAAACCAAGCGAACCTCTCGTTGACAAAATCTTACGCTGCTTGCCACCTTCAGTTCCAGCTTCAGACAAGATTATCCTTACAACATTGCTAGTGGTGATTATGGTGAAATGTTTGTCCAAGAAGAAGCTTGGTAGACAAGCTAACTTGAAAGAGATCGCTGCGTGGTCTGGATTGTACTGGTTCTGCAAAAGAGAAATTGAGAATGCAATGAATTATGGCGATGAAAAGATATGCCTTGGGCGTGGGAGTGCAGGGCAGGTGTATAAAGGTGTTCTTCCAAGTGGCCAAGTCGTGGCCATCAAGCATTTAACAAAGAGCAACACCTCTGAGTCTTTCACTCGAGAAGTTGAAGGTCTTTCAAGGCTTCGCCATCCTAACCTGGTTTGCCTCTTTGGATGTTGCATAGAAGGGAATGACAGATATTTAGTCTATGAATTTTGTGCAAATGGGAATCTTGCTCAACATCTCTTAAGAAGAGATAGCCACTTGACATGGGAAACGAGAGTAAGAATTTTGAGAGATTGTTCATATGCACTAAAGTATCTCCACCATCATATAGAAGGCTGTGTAGTCCATAGAGATATAAAGGCAAGAGACGTGAGCATGGGAAAGCGTCTACTGTCGGATTTTGAAGACCCACGGCTAAATGGAAAAATTGATAAGGCAGACTTCGAAGCCATCCTTCATATTGCAGTGTTGTGTGTTGCCAAATCAAGCAAAGGTCGTCCAACCATTGAGGTTGTTTTTGAGGAATTGGACAAGGTCTGCAGGGACACAGAAACACGGACACGGACGTTAATGGGATTGTTGTCCATGGCTAGAAGAGAAAGTCAGTTCCTAAAACTTGTGCATGCTGGAGGGTTTGTAGAGCTACACGTTAACCCAATCATGGCTTCTGAAATCATGAACAAGAATCCTAGGCACTATGTTACGCGACCTGACTTCTTCCAGTTTCCTTGGATTGTTGTCAACCCAGAATCCATTCTCACGCCAGGCAACGTTTTCTACATCGTACCTTGTCACACAATCCGCCATAAGATGAAGTCAACTAACACCCTTCTTCCCAATCAAATTCATCAAGATCATCGCCGCAGATCAGAATGCAAAATTCGATGCTTCCAAAAACATTCCTCCGTTTCCAAACAAGGTAACTGGGCTCAATCTTCTTTCACAGGAAAACTAGCTGTTTATTATTCTAGCGACGCCTACACTTCAAGTGACTCAGGAAAACTAAAGGTACGAAGCCGTAGTGGTGGTAGATTCAGCCATAATTCTGACCAGACTCTGAAGCCGTGCCTCAAAAAAGATAAGACCCACAGTACTGCTAGATCGCGACGTAATCTTAAAAACTTTGTAATTGAGAACGTCGTCGTTTACTCATACTTTAGGAAAGATGCCACTTGGTTCAAGGCCGTGATCCAATTCCAACATTCTTCTCTGCAGGATGCTGCTAAACAAATTGATAGTTAG 2121 0.4437 MMVFVWTANRPVTATTTDTSTLSISFLANGLNIPKSNSFCQGPLRACLLTFNMSQYVSFGECGDVNEDIDMWGNDGFPTTLCCRNALTVMSNALASLAIKLFVGRHVFLSQDETQSCAQSFHPQQGMSFNSCGFQSLYIGSSKCSDIYLQDVTKLQQYQDALDKCSHFDHPFDQSCADCTAAILSVRDTLVLQVANNNNYTEVAICGVAAIVAVATGKPSEPLVDKILRCLPPSVPASDKIILTTLLVVIMVKCLSKKKLGRQANLKEIAAWSGLYWFCKREIENAMNYGDEKICLGRGSAGQVYKGVLPSGQVVAIKHLTKSNTSESFTREVEGLSRLRHPNLVCLFGCCIEGNDRYLVYEFCANGNLAQHLLRRDSHLTWETRVRILRDCSYALKYLHHHIEGCVVHRDIKARDVSMGKRLLSDFEDPRLNGKIDKADFEAILHIAVLCVAKSSKGRPTIEVVFEELDKVCRDTETRTRTLMGLLSMARRESQFLKLVHAGGFVELHVNPIMASEIMNKNPRHYVTRPDFFQFPWIVVNPESILTPGNVFYIVPCHTIRHKMKSTNTLLPNQIHQDHRRRSECKIRCFQKHSSVSKQGNWAQSSFTGKLAVYYSSDAYTSSDSGKLKVRSRSGGRFSHNSDQTLKPCLKKDKTHSTARSRRNLKNFVIENVVVYSYFRKDATWFKAVIQFQHSSLQDAAKQIDS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2624 706 ProSiteProfiles Protein kinase domain profile. 290 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2624 706 PANTHER OS01G0253100 PROTEIN 414 484 IPR045271 GO:0004714|GO:0006468
Aed2g2624 706 Pfam PADRE domain 484 639 IPR025322 -
Aed2g2624 706 Pfam Protein tyrosine and serine/threonine kinase 296 422 IPR001245 GO:0004672|GO:0006468
Aed2g2624 706 Gene3D Phosphorylase Kinase; domain 1 252 363 - -
Aed2g2624 706 SUPERFAMILY Protein kinase-like (PK-like) 271 417 IPR011009 -
Aed2g2624 706 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 414 484 - -
Aed2g2624 706 Pfam SPARK 46 199 IPR043891 -
Aed2g2624 706 PANTHER OS01G0253100 PROTEIN 58 414 IPR045271 GO:0004714|GO:0006468
Aed2g2624 706 Gene3D Transferase(Phosphotransferase) domain 1 364 428 - -
Aed2g2624 706 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 58 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2624 Aed-Chr2 28537953 28544874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2624 243 433 Receptor kinase-like Gene Family AT1G53430 36.181 2.53e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Aed2g2624 DUF4228 2.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2624 - - gmx:100790391 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2624 2 28537953 28544874 Aed2g0634 2 4586616 4590207 PCT