Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2618 ATGGTTAATTACAAAGAAACAAAAATATCAGCACTGATTGTGGATGATGACGCTATCATTCGCAAAATCCACAAGACCATGCTCGAGCGCATATTTAACATAGAGGCAACAGCGGTTAATGATGGAAAGGAAGCAGTGGATCTGTGTCGTTCTGGGGTAAATTTTGACATCATTTTCATGGACAAAGAAATGCCTATCATGGATGGTCACGAGGCGACAAAACATCTACGTGCTATGGGTGTGAGGAGCATCATTGTGGGAATCACTACCTGTGCTGATAGAAAAGATAAAGAGGAATTTCTAGCTGCTGGATCGAACCATTGCTTTGAGAAGCCTCTTGACCAAGCAAATGTTGAACAAGTCTTGCAAATTTCGCATTTGATGATTCACTTTTGTAACAGACCAATATAG 411 0.4063 MVNYKETKISALIVDDDAIIRKIHKTMLERIFNIEATAVNDGKEAVDLCRSGVNFDIIFMDKEMPIMDGHEATKHLRAMGVRSIIVGITTCADRKDKEEFLAAGSNHCFEKPLDQANVEQVLQISHLMIHFCNRPI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2618 136 SUPERFAMILY CheY-like 8 123 IPR011006 -
Aed2g2618 136 Pfam Response regulator receiver domain 12 122 IPR001789 GO:0000160
Aed2g2618 136 Gene3D - 3 128 - -
Aed2g2618 136 ProSiteProfiles Response regulatory domain profile. 10 126 IPR001789 GO:0000160
Aed2g2618 136 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 123 - -
Aed2g2618 136 SMART REC_2 9 122 IPR001789 GO:0000160
Aed2g2618 136 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 5 123 - -
Aed2g2618 136 CDD REC_hyHK_CKI1_RcsC-like 12 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2618 Aed-Chr2 28494094 28494731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2618 2 127 Response Regulator Gene Family AT3G04280 47.656 1.04e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed2g2618 Response_reg 5.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2618 - - gmx:102665311 218.394