Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2608 ATGGAACCTAATGACAACCACCAACTCACCTCCTTTTTCCACCAACACCACCAACAACAACAACACCAACACCACCAGCAAGAGCAACAGCACCACCAGGCGGCGGCGGCGCCGCCGCCGCATAGCACCGCGTCTCCGACAAACGGCCTCTTGCCGAACGCGGATGGGTCCCACATGCTGTACCCTCACTCGGTGGCGTCCGCTGTGTCGTCACAGCTGGAACCGGCGAAGCGGAAGCGCGGGCGGCCGAGGAAGTACGGGACGCCGGAGCAAGCTCTTGCCGCGAAGAAGGCCGCTACGACGTCGTCTCAGTCGTTCTCTGCGGACAAGAAGCCCCACTCTCCGACCTTCCTTTCCTCTTCTTTCACTTCTTCCAAGAAATCCCATTCCTTCGCTCTAGGCAATGCAGGGCAAGGCTTCACTCCGCATGTCATTTCTGTTGCTGCTGGTGAGGATGTCGGCCAGAAAATTATGTTATTTATGCAACAAAGTAGGCGTGAGATGTGTATTCTGTCTGCATCTGGTTCCATCTCGAATGCCTCTCTTCGCCAACCAGCAACCTCAGGAGGCAGCATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCTTATGTCCGTAATGAACTTGGAACTCGAACTGGTGGTCTTAGTGTATGCTTATCTAATACTGATGGACAAATCATAGGTGGTGGAGTTGGTGGGCCGCTTAAAGCAGCTGGTCCAGTTCAGGTCATCGTTGGAACATTCTTTATTGACAACAAGAAGGATACTGGTGCTGGTGTAAAAGGTGATGCCTCTGCCAGCAAGTTGCCATCTCCAGTTGGTGTACCGGTATCAAGTTTAGGTTTCCTCCAATCAGTCGACTCTTCCAGTGGTAATCCAATCCGCGGTAATGATGAGTATCAAGCTATGGAGGAAGGTCATTTCGCTGTGGGGGGAAATCAATTCGGCTATATTCGACAAAATTAG 978 0.5174 MEPNDNHQLTSFFHQHHQQQQHQHHQQEQQHHQAAAAPPPHSTASPTNGLLPNADGSHMLYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTSSQSFSADKKPHSPTFLSSSFTSSKKSHSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGSITYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDTGAGVKGDASASKLPSPVGVPVSSLGFLQSVDSSSGNPIRGNDEYQAMEEGHFAVGGNQFGYIRQN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2608 325 Pfam Plants and Prokaryotes Conserved (PCC) domain 142 252 IPR005175 -
Aed2g2608 325 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 252 - -
Aed2g2608 325 Gene3D - 142 265 - -
Aed2g2608 325 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 315 - -
Aed2g2608 325 MobiDBLite consensus disorder prediction 1 121 - -
Aed2g2608 325 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 315 IPR039605 GO:0003680
Aed2g2608 325 CDD DUF296 141 252 IPR005175 -
Aed2g2608 325 MobiDBLite consensus disorder prediction 1 17 - -
Aed2g2608 325 ProSiteProfiles PPC domain profile profile. 136 277 IPR005175 -
Aed2g2608 325 MobiDBLite consensus disorder prediction 95 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2608 Aed-Chr2 28403471 28408641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2608 55 316 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 55.147 4.19e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2608 - - gmx:100816781 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2608 2 28403471 28408641 Aed2g2608 2 28403471 28408641 ECH