Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2607 ATGCAAAACCCTAAACCCTCGCGGCTAGGGTTAGAGCTACGGCATGCTCTATATTTATCCCATTGTTGCGCCTCTTTCATTGATCGTAGCCAACTTCAACCTCAGAATGATGATTTAAAGTTTCAACGAACTAAGAAATTTGATCGAGGCCAGATAGTGGTGATCAATATGTCAAAAAATCCAAAAGTTTTCTTTGATATTGTAATTGGAAAGATGAAAGCTGGGCGAGTAGTGATGGAGTTGTTTGCTGATGCAACCCCAAAAACAGCTGAAAACTTCAGGGCACTCTGCACTGGGGAAAAGGGTATTGGACAATCTGGGAAACCTTTACATTACAAAGGCTCTGCATTTCATCGTATTATTCCAGAGTTTATGTGTCAGGGAGGAGATTTTACAAGAGGGAATGGAACAGGGGGTGAGTCAATCTACGGTTCCAAATTTCAAGATGAGAATTTCAATTTGAAGCATACTGGTCCTGGTATTCTTTCCATGGCAAATGCTGGACCCCATACTAATGGTTCTCAGTTCTTCATATGTACTGCAAAGACACCGTGGCTTGATGGAAAACATGTTGTCTTTGGAAAAGTTGTTGATGGATACAGCGTTGTGGATGAGATGGAGAAAGTGGGTTCAGGTAGTGGCAGAACTTCTGAACCGGTAGTAATCGAAGATTGTGGTCAGATTGTAGAGAAATGA 696 0.4167 MQNPKPSRLGLELRHALYLSHCCASFIDRSQLQPQNDDLKFQRTKKFDRGQIVVINMSKNPKVFFDIVIGKMKAGRVVMELFADATPKTAENFRALCTGEKGIGQSGKPLHYKGSAFHRIIPEFMCQGGDFTRGNGTGGESIYGSKFQDENFNLKHTGPGILSMANAGPHTNGSQFFICTAKTPWLDGKHVVFGKVVDGYSVVDEMEKVGSGSGRTSEPVVIEDCGQIVEK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2607 231 CDD cyclophilin_ABH_like 61 226 - -
Aed2g2607 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 IPR002130 GO:0000413|GO:0003755
Aed2g2607 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 175 187 IPR002130 GO:0000413|GO:0003755
Aed2g2607 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 96 IPR002130 GO:0000413|GO:0003755
Aed2g2607 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 175 IPR002130 GO:0000413|GO:0003755
Aed2g2607 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 188 203 IPR002130 GO:0000413|GO:0003755
Aed2g2607 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 71 226 IPR002130 GO:0000413|GO:0003755
Aed2g2607 231 SUPERFAMILY Cyclophilin-like 55 228 IPR029000 -
Aed2g2607 231 Gene3D - 52 231 IPR029000 -
Aed2g2607 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 58 229 - -
Aed2g2607 231 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 112 129 IPR020892 GO:0003755|GO:0006457
Aed2g2607 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 64 227 IPR002130 GO:0000413|GO:0003755
Aed2g2607 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 58 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2607 Aed-Chr2 28396596 28402048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2607 54 209 U-box Gene Family AT5G67530 46.584 2.67e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2607 K01802 - gmx:100809134 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2607 2 28396596 28402048 Aed2g2607 2 28396596 28402048 ECH