Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2605 ATGACTCTGGAGAAGCAACAATACCAAGTTTTGGAAGAAATCGGGCGGGGCCGTTTCGGCACGGTGTTCCGGTGCTTGGACCGCACATCGAAGCAATTATACGCCGCGAAAGTGATATCGAAGCGTGTATTGACGGACTCGACGGACCGGCAGTGCCTGGAAACAGAGGCGAAGGCGATGAGGTTCCTATCTCCGCATCCAAACATCCTCCAAATCACGGACTCCTTCGAGGACGCAGAGTCCTCTACCATCGTCCTCCAGCTCTGCCAGACGCGCACCCTCTTCGACCGCATCGCCGAAGGCCCCCTCCCGGAGCCCCACGCCGCCTTCCTAATCAAACAGCTCCTCGAAGCCGTGGCTCACTGCCACGCGCTCGGAGTCGCGCACCGGGACATCAAGCCCGACAACCTCCTCTTCGACGTCGAAGGGAACAACAAGCTTAAGCTGTCGGACTTCGGGTCCGCGGAGTGGTTCGGTGAGGGGAGGAGCATGAGCGGTGTGGTGGGGACGCCCTATTACGTGGCGCCCGAAATGGTGATGGGGAGAAACTACGATGAGAAGGTTGATGTTTGGAGCAGTGGTGTAATTCTCTACGCCATGTTGGCTGGCTTTCCGCCCTTTTACGGAGACTCTGCCTCTCAGATATTTGAGGCTGTTTTGAGGACCAGTCTTAGGTTCCCCACAACCGTTTTTAGGTCTGTCTCTGCCCCTGCCAAGGACCTCCTTAGAAAGATGATTTCTAGGGATCCTTCTAGGCGCATTTCCGCACAACAAGCCTTGAGACACCCGTGGATTTTGAGTGCTGACAATTTTTCTTGA 819 0.5592 MTLEKQQYQVLEEIGRGRFGTVFRCLDRTSKQLYAAKVISKRVLTDSTDRQCLETEAKAMRFLSPHPNILQITDSFEDAESSTIVLQLCQTRTLFDRIAEGPLPEPHAAFLIKQLLEAVAHCHALGVAHRDIKPDNLLFDVEGNNKLKLSDFGSAEWFGEGRSMSGVVGTPYYVAPEMVMGRNYDEKVDVWSSGVILYAMLAGFPPFYGDSASQIFEAVLRTSLRFPTTVFRSVSAPAKDLLRKMISRDPSRRISAQQALRHPWILSADNFS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2605 272 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 269 - -
Aed2g2605 272 Pfam Protein kinase domain 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2605 272 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Aed2g2605 272 Gene3D Transferase(Phosphotransferase) domain 1 92 271 - -
Aed2g2605 272 ProSiteProfiles Protein kinase domain profile. 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2605 272 SMART serkin_6 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2605 272 Gene3D Phosphorylase Kinase; domain 1 2 90 - -
Aed2g2605 272 PIRSF ILK 1 261 - -
Aed2g2605 272 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 2 269 - -
Aed2g2605 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Aed2g2605 272 CDD STKc_CAMK 7 264 - -
Aed2g2605 272 SUPERFAMILY Protein kinase-like (PK-like) 6 268 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2605 Aed-Chr2 28383269 28384196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2605 5 266 EF-hand Containing Proteins AT4G09570 43.182 1.80e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed2g2605 Pkinase 6.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2605 - K08794 gmx:547573 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2605 2 28383269 28384196 Aed8g1878 8 23454341 23455705 ECH
Aed2g2605 2 28383269 28384196 Aed2g2605 2 28383269 28384196 ECH