Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2598 ATGACGAGAAGTACCACCCCTTGTTGTGAGAAAATGGGATTGAAGAAGGGTCCTTGGACTGCTGAAGAAGATCAGATTTTGGTTTCTCATATTCAACTCTATGGCCATGGAAACTGGCGTGCCCTTCCTAAACAAGCTGGTTTGTTGAGGTGTGGCAAGAGTTGTAGGCTTCGTTGGATAAACTACTTGAGGCCAGATATTAAACGAGGCAAATTCAGCAAGGAAGAAGAAGATACCATCCTAAAGCTACATCAAATCCTTGGAAATAGATGGTCTGCTATAGCGGCGAGCTTACCCGGAAGAACAGACAACGAAATAAAGAATTTTTGGCACACCCATTTGAAGAAGAGGATGGATCAGAAAAATAGATCAGTGCACAAGCACAGTGGCAATGCTTCTTCTCATATTCTGCAACCAAATACTTCGGATGCATCATCAAGTGACAATTACGGTTTAGCCTCCTCCTCATCAAGGAATATTAATGCAGAATTTTACGGTTTAGTCTCCCCAGATAGTACTTTTGGAGAAATTGATGAGGGCAATCATACTTCTTGTCAGCTCAGTGAAGAAATGGAGTTTTGGTACAATATATTCATCAAATCAGGCCAAACATCATCATGA 621 0.4138 MTRSTTPCCEKMGLKKGPWTAEEDQILVSHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDTILKLHQILGNRWSAIAASLPGRTDNEIKNFWHTHLKKRMDQKNRSVHKHSGNASSHILQPNTSDASSSDNYGLASSSSRNINAEFYGLVSPDSTFGEIDEGNHTSCQLSEEMEFWYNIFIKSGQTSS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2598 206 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Aed2g2598 206 SUPERFAMILY Homeodomain-like 12 110 IPR009057 -
Aed2g2598 206 MobiDBLite consensus disorder prediction 127 152 - -
Aed2g2598 206 PANTHER MYB TRANSCRIPTION FACTOR 5 204 - -
Aed2g2598 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Aed2g2598 206 Gene3D - 70 138 - -
Aed2g2598 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Aed2g2598 206 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 204 - -
Aed2g2598 206 CDD SANT 71 114 IPR001005 -
Aed2g2598 206 Gene3D - 15 68 - -
Aed2g2598 206 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Aed2g2598 206 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Aed2g2598 206 MobiDBLite consensus disorder prediction 120 152 - -
Aed2g2598 206 CDD SANT 18 63 IPR001005 -
Aed2g2598 206 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Aed2g2598 206 SMART sant 15 65 IPR001005 -
Aed2g2598 206 SMART sant 68 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2598 Aed-Chr2 28303886 28304962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2598 7 123 MYB Transcription Factor Family AT1G06180 78.512 1.28e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g2598 Myb_DNA-binding 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2598 K09422 - gmx:102663040 311.997