Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed2g2598 | ATGACGAGAAGTACCACCCCTTGTTGTGAGAAAATGGGATTGAAGAAGGGTCCTTGGACTGCTGAAGAAGATCAGATTTTGGTTTCTCATATTCAACTCTATGGCCATGGAAACTGGCGTGCCCTTCCTAAACAAGCTGGTTTGTTGAGGTGTGGCAAGAGTTGTAGGCTTCGTTGGATAAACTACTTGAGGCCAGATATTAAACGAGGCAAATTCAGCAAGGAAGAAGAAGATACCATCCTAAAGCTACATCAAATCCTTGGAAATAGATGGTCTGCTATAGCGGCGAGCTTACCCGGAAGAACAGACAACGAAATAAAGAATTTTTGGCACACCCATTTGAAGAAGAGGATGGATCAGAAAAATAGATCAGTGCACAAGCACAGTGGCAATGCTTCTTCTCATATTCTGCAACCAAATACTTCGGATGCATCATCAAGTGACAATTACGGTTTAGCCTCCTCCTCATCAAGGAATATTAATGCAGAATTTTACGGTTTAGTCTCCCCAGATAGTACTTTTGGAGAAATTGATGAGGGCAATCATACTTCTTGTCAGCTCAGTGAAGAAATGGAGTTTTGGTACAATATATTCATCAAATCAGGCCAAACATCATCATGA | 621 | 0.4138 | MTRSTTPCCEKMGLKKGPWTAEEDQILVSHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDTILKLHQILGNRWSAIAASLPGRTDNEIKNFWHTHLKKRMDQKNRSVHKHSGNASSHILQPNTSDASSSDNYGLASSSSRNINAEFYGLVSPDSTFGEIDEGNHTSCQLSEEMEFWYNIFIKSGQTSS | 206 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed2g2598 | 206 | ProSiteProfiles | Myb-like domain profile. | 64 | 114 | IPR001005 | - | |
Aed2g2598 | 206 | SUPERFAMILY | Homeodomain-like | 12 | 110 | IPR009057 | - | |
Aed2g2598 | 206 | MobiDBLite | consensus disorder prediction | 127 | 152 | - | - | |
Aed2g2598 | 206 | PANTHER | MYB TRANSCRIPTION FACTOR | 5 | 204 | - | - | |
Aed2g2598 | 206 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 64 | 118 | IPR017930 | - | |
Aed2g2598 | 206 | Gene3D | - | 70 | 138 | - | - | |
Aed2g2598 | 206 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 11 | 63 | IPR017930 | - | |
Aed2g2598 | 206 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 5 | 204 | - | - | |
Aed2g2598 | 206 | CDD | SANT | 71 | 114 | IPR001005 | - | |
Aed2g2598 | 206 | Gene3D | - | 15 | 68 | - | - | |
Aed2g2598 | 206 | Pfam | Myb-like DNA-binding domain | 16 | 63 | IPR001005 | - | |
Aed2g2598 | 206 | Pfam | Myb-like DNA-binding domain | 69 | 114 | IPR001005 | - | |
Aed2g2598 | 206 | MobiDBLite | consensus disorder prediction | 120 | 152 | - | - | |
Aed2g2598 | 206 | CDD | SANT | 18 | 63 | IPR001005 | - | |
Aed2g2598 | 206 | ProSiteProfiles | Myb-like domain profile. | 11 | 63 | IPR001005 | - | |
Aed2g2598 | 206 | SMART | sant | 15 | 65 | IPR001005 | - | |
Aed2g2598 | 206 | SMART | sant | 68 | 116 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed2g2598 | Aed-Chr2 | 28303886 | 28304962 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed2g2598 | 7 | 123 | MYB Transcription Factor Family | AT1G06180 | 78.512 | 1.28e-69 | 211 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Aed2g2598 | Myb_DNA-binding | 2.7e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed2g2598 | K09422 | - | gmx:102663040 | 311.997 |