Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2593 ATGTCTACATCTTCTCGTGTTCTTCCCACTCCCTTGGGAAACAAGTATATGAAACCCCCAGATTCTTTTCAGCTTTCACCCATCAGAGATGTTACTGCAAATTCTGCCTCATCAAGTTCAATCAGAAGTGCTGGGAAGATGTTGTCATCACCTTCTTCATGTCCCGATGACATCCCTTTTTCCTCTGTTTCACAGCATGATAGGCAATATCAAGATCTCCCCTTTGTTTCTCAGACATTGGGTGATAATGTGTCTTCTGAAATACATTCGACAGCATTCATTTCTCACCCTCAAGAAAATGAAGATCTTTCCTGGGGACCAGATCCATTTCAGGATATTCTTGGCTTCCCTGAAAATGTTTCTGTCCAGCATGACCAGGTGGAAAACAATGCTTGTTACATAAATGATGATAATGTCAAAAGATCTGATTTTGGAGAGTGGGTTGATCAGCTAATGTCAATTGATGATTCTCTTCACCCGAACTGGAGTCAGCTTCTTGGTGATGACAATGTAGAAGAACCAACACCAAAGGCATCTCAGGTTTCTCAGCAGCAGCATATACCATCTGGAGAAGTTCTTTCTAATTCAGCAGTAACTGCACCGCAGACTAAGCCTAGGATGCGTTGGACTCCAGAGCTTCATGAGGCCTTTGTGGAAGCAGTCAATCAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAGGGTGTGTTGAATCAAATGAAAGTCGAGGGCCTTACCATCTATCATGTAAAAAGCCACTTACAGAAGTATAGAACTGCCCGATACAAACCAGAGTCACCAGAAGGAACGTCTGAGAAAAAGGTGATTCCAATGGAAGAAATGAAATCTCTAGACTTGAAAACGAGTAAGGGGATCACTGAAGCATTACGTTTACAGATGGAACTCCAGAAGCGACTTCACGAACAACTTGAGATCCAAAGAACGTTGCAGATTCAAATTGAAGACCAAGGGAAACGTCTTCAGGTGATGTTTGAGAAACAGAGAGAGATGGGTGACAGCAAGGGTAAGGGGTCTTCTGGTGCACCATCAGACACGGTGCTTCCGTCTTCTCCAAATGAGGTAGGTGACAAATCTGATGGCATTCAAAAAGCCATGTCTGAAGAGAAGGATGCAAGCACAAAGAAAATGGCAGGTGAAGCTGAAGAAGTGATCAATGAAGATGCACCACCCACAAAACGGGTGAAAAGTTCATAA 1212 0.434 MSTSSRVLPTPLGNKYMKPPDSFQLSPIRDVTANSASSSSIRSAGKMLSSPSSCPDDIPFSSVSQHDRQYQDLPFVSQTLGDNVSSEIHSTAFISHPQENEDLSWGPDPFQDILGFPENVSVQHDQVENNACYINDDNVKRSDFGEWVDQLMSIDDSLHPNWSQLLGDDNVEEPTPKASQVSQQQHIPSGEVLSNSAVTAPQTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNQMKVEGLTIYHVKSHLQKYRTARYKPESPEGTSEKKVIPMEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRTLQIQIEDQGKRLQVMFEKQREMGDSKGKGSSGAPSDTVLPSSPNEVGDKSDGIQKAMSEEKDASTKKMAGEAEEVINEDAPPTKRVKSS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2593 403 MobiDBLite consensus disorder prediction 333 403 - -
Aed2g2593 403 Gene3D - 203 262 - -
Aed2g2593 403 MobiDBLite consensus disorder prediction 344 362 - -
Aed2g2593 403 MobiDBLite consensus disorder prediction 1 65 - -
Aed2g2593 403 Pfam Myb-like DNA-binding domain 206 257 IPR001005 -
Aed2g2593 403 MobiDBLite consensus disorder prediction 27 65 - -
Aed2g2593 403 SUPERFAMILY Homeodomain-like 202 258 IPR009057 -
Aed2g2593 403 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 204 258 IPR006447 GO:0003677
Aed2g2593 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 261 IPR017930 -
Aed2g2593 403 MobiDBLite consensus disorder prediction 366 403 - -
Aed2g2593 403 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 403 - -
Aed2g2593 403 Pfam MYB-CC type transfactor, LHEQLE motif 291 335 IPR025756 -
Aed2g2593 403 Coils Coil 292 312 - -
Aed2g2593 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 403 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2593 Aed-Chr2 28276303 28280626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2593 43 358 G2-like Transcription Factor Family AT3G04450 44.444 3.81e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed2g2593 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2593 - - gmx:100803267 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2593 2 28276303 28280626 Aed2g2593 2 28276303 28280626 ECH
Aed2g2593 2 28276303 28280626 Aed8g0961 8 8380721 8387421 PCT