Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2572 ATGCATTCTAGTGCAAAAGGATTCTTGCTTTCTCTTGTCTGTGTCTTTGTTTTGTTGAATGGCATTGATGGTGCATGGAATGAGGAGGCAGGTTCTTTGATTTTGGGTTGTGGGTTAGATAAAGGAGGTGCCAAAGATGTCGATGGAAGGCAATGGAGTCCTGATGAAAAGTTCTTGGGATCAGAAGAAGGTAATTCAATCACATCCAAAGCTTCTTACCAAGACCCTTCCCTTACGTCTGAGATTCCATACATGTCAGCACGTGTTTTCACATCTGAGACAACATACAAATTCCCAGTTGAATCCGATAAGCGCTATTGGCTCAGGCTCCACTTTTACCCGGCTTTTTATGGCACTTTCATTCCTGCTGACTCATTTTTCTCAGTGACTGCAAATGGGGTTACCCTCCTCTCCAATTTCAGTGCCTTAACCACTTGTGAGGCCCTCTCACAAGCCTACATTGATAGAGAGTACTCCCTTGCACCTTTGAATTCAGATGTTTTGACTCTCACTTTCAAGCCTTCTGATAAATACAAAGGCACATTTGCTTTTCTCAATGGCATTCAGCTCATTCCAATGCCTGAGTTGTTTGATTCTGGAGCATTGGTAGGGTATGCTGACCAAACCATGGATGTGAAGAGCTTGAATTTGCAAACCATGTTTAGGCTAAACGTTGGTGGACAATACATATCTCCAACACAAGACTCTGGCCTTACAAGGATGTGGTATGATGACACTCCTTACCTTTATGGTGCAGGAACTGGTGTGACCAACCAAGCTGAGAAGAATGTCCAAATCAACTACCAATCCATGCCAAAGTCCATTGCTCCTCCTGATGTCTACTCCACATCAAGATCAATGGGGAATGACAAGGATGTCAACATGGCATTCAATCTCACTTGGATCTTCCAAGTTGATCCCAATTCCATGTACCTTGCAAGGTTGCATTTCTGTGATTATTATTACTCCAAGGTCAATGAGATTGTTTTCGACATCTTTATCAACAACCAAACCGCACAAACTCAAGCTGATGTTATTGGGTGGACAGGAGCTAAGGGAGTTCCAACTTATAAGGACTATGTGATATATGTCCCAGATGGGGAGGGTGATGAGATGCTTTGGCTGGCTCTTCACCCTGCATCTGGCACAAAACCTGAGTACTATGATGCCATACTGAATGGAGTGGAAATATTCAAGCTCAACGACACAGACTTGTCTGGTCCCAATCCTCAGCTCTCGGAAATGCTTCTGAAGCAGCAAGAGGAGAATCAGGAAGCAGGTTTTGTTAGCCACAAAGCATATCATAGGCATGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTTTTGCTTTCATGGCTGCAATATTCGTTGCTGTGTACAACAAGAAGAAGAGGGTTCCAGGGTCAGAGGGTCAGTCAAGTTGGCTTCCCCTCTACTTGAACTCAAGAAACAGCAAGTCCTCTACGTCCGGGAAGAGCAACGTCAGCAGTGCCAACTTATCTGCCATGGCTCAAGGTCTTTGCCGCTATTTCTCCTTGCAGGAAATAAGGCAAGCAACGAAGAATTTTGATGAGTCCAACGTGATTGGGGTTGGTGGATTTGGAAAGGTGTACAAGGGTGTGATTGATAATGGATTTAAGGTGGCAGTGAAGAGGTCGAACCCGCAGTCAGATCAAGGAGTTAATGAATTCCAAACGGAAATAGAAATGCTTTCCAAGCTGAGACACAAGCATCTGGTGTCCTTGATTGGTTTCTGCGAGGAAAATGATGAGATGTGTCTGAAAGGAACTCTAGAGGATATGATTGACCCGTTTCTCAAGGGAAAGATCAATCCAGAAAGCTTGAATAAGTTTGTGGACACTGCTGAAAAGTGCTTGTCTGATCATGGTACTGACCGTCCCTCCATGAATGATCTCTTATGGAATCTCGAATTCGCTCTCAACCTGCAAGAAAATCATGAAGGTGCTAAGGAAACTGAGTTTCAAAACGTAAGCTTGAAAGACAACGAAATGGCACGCCACTATAAAAACTTGAGCCTTGGAAGTGACCATGACCTTAGCGATTAG 2070 0.442 MHSSAKGFLLSLVCVFVLLNGIDGAWNEEAGSLILGCGLDKGGAKDVDGRQWSPDEKFLGSEEGNSITSKASYQDPSLTSEIPYMSARVFTSETTYKFPVESDKRYWLRLHFYPAFYGTFIPADSFFSVTANGVTLLSNFSALTTCEALSQAYIDREYSLAPLNSDVLTLTFKPSDKYKGTFAFLNGIQLIPMPELFDSGALVGYADQTMDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGAGTGVTNQAEKNVQINYQSMPKSIAPPDVYSTSRSMGNDKDVNMAFNLTWIFQVDPNSMYLARLHFCDYYYSKVNEIVFDIFINNQTAQTQADVIGWTGAKGVPTYKDYVIYVPDGEGDEMLWLALHPASGTKPEYYDAILNGVEIFKLNDTDLSGPNPQLSEMLLKQQEENQEAGFVSHKAYHRHAVIGGAAGGAAGFAFMAAIFVAVYNKKKRVPGSEGQSSWLPLYLNSRNSKSSTSGKSNVSSANLSAMAQGLCRYFSLQEIRQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAVKRSNPQSDQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLKGTLEDMIDPFLKGKINPESLNKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQENHEGAKETEFQNVSLKDNEMARHYKNLSLGSDHDLSD 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2572 689 Pfam Malectin-like domain 36 399 IPR024788 -
Aed2g2572 689 Gene3D - 35 193 - -
Aed2g2572 689 Gene3D - 215 401 - -
Aed2g2572 689 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Aed2g2572 689 SMART tyrkin_6 524 644 IPR020635 GO:0004713|GO:0006468
Aed2g2572 689 ProSiteProfiles Protein kinase domain profile. 524 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2572 689 PANTHER OS07G0166700 PROTEIN 596 686 IPR045272 GO:0004714|GO:0006468
Aed2g2572 689 Gene3D Phosphorylase Kinase; domain 1 483 595 - -
Aed2g2572 689 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 595 - -
Aed2g2572 689 SUPERFAMILY Protein kinase-like (PK-like) 499 604 IPR011009 -
Aed2g2572 689 PANTHER OS07G0166700 PROTEIN 20 595 IPR045272 GO:0004714|GO:0006468
Aed2g2572 689 Pfam Protein kinase domain 525 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2572 689 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 596 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2572 Aed-Chr2 28162333 28164858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2572 596 655 Receptor kinase-like Gene Family AT3G51550 61.667 3.18e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aed2g2572 Malectin_like 3.9e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2572 - - gmx:102659961 1023.46