Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2563 ATGGAAAGGGTGGTGTCAGTGGATGAAATATCGGAGCAATATTGGGCGGCAGCAGCGGCGAGGTGCAAGTCAAAGTCAAAGTCAAAGTCAAAGATGAACCGGAGCGAATCGGAGTGGGCATTTCAGCAATTCCTGCAGGAAGCTGCTGCTTCTTCTGATCATGATGTTAAATTCAAAGAGGAGGAGGGTCCCAACATCCCTGGAACTCTTAATGTTGATTCCGATGACTACCAAGCTATTCTTAAGACCAAGCTTAATCTAGCATGCGCTGCTGTCGCTTTGACTCGGGGATCTTTGGTCAAATCTCAAAATCCTGTCTCTTTCCCTGACAGTGGTGGACGGCAGGCATCTAATTCTTCTGAAGTTGAATCGCAGGCTACCTTAAAAGGATCTGTCCCTTTTGGAAATGATCCCTCTAAATTACAAAATAAAGATGTCAAAGCACAAATTGAGATCCCTTCCTCACCTTCCATACAAAACAAATCTGGTGTCTCAATGAGGCCAACAATAAGTGGATCATCAAGAGAACAATCAGATGATGAAGAAGCGGAGGGAGAGTTCAATATGACTGAAGACATGAAACCTGTGGATGCAAAACGCGTAAGGAGGATGCTTTCTAATAGGGAGTCAGCGAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAAGTGAGCTGGAGACACAGGTCTCCCAATTAAGAAGTGAAAATTCTTCATTGTTAAAGCGCTTCACGGATGTGAGCCAGAAATACAATAATTCTGCAGTTGACAACAGAGTACTGAAAGCCGATGTTGAAACACTAAGAGCAAAGGTGAAGATGGCTGAAGAGACAGTGAAAAGAATTACTGGGTTGAATCCAATGCTCCAAGCCATGACTGAGGTGTCATCAATGGGAATGTCATTGTTTGATGAACGCCCTTCTGAGACATCAGCTGATGCTGCTGTTCCTGTGCAAGAAGACCCAAATCACCAGCTTTGTCAACCACCCACTTCTAATAATGGGTTGGGAGGCATTTCTTCAATTGAAACTGTGCAGCAGAATGTTGCGGCAGGTGGCAACAAAACGGGGAGAACAACTTCCCTGCATAGAGTGGCCAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGAAATGGAGAGCAATAA 1146 0.4494 MERVVSVDEISEQYWAAAAARCKSKSKSKSKMNRSESEWAFQQFLQEAAASSDHDVKFKEEEGPNIPGTLNVDSDDYQAILKTKLNLACAAVALTRGSLVKSQNPVSFPDSGGRQASNSSEVESQATLKGSVPFGNDPSKLQNKDVKAQIEIPSSPSIQNKSGVSMRPTISGSSREQSDDEEAEGEFNMTEDMKPVDAKRVRRMLSNRESARRSRRRKQAHLSELETQVSQLRSENSSLLKRFTDVSQKYNNSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMLQAMTEVSSMGMSLFDERPSETSADAAVPVQEDPNHQLCQPPTSNNGLGGISSIETVQQNVAAGGNKTGRTTSLHRVASLEHLQKRIRGGNGEQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2563 381 Coils Coil 208 242 - -
Aed2g2563 381 MobiDBLite consensus disorder prediction 188 208 - -
Aed2g2563 381 MobiDBLite consensus disorder prediction 351 365 - -
Aed2g2563 381 MobiDBLite consensus disorder prediction 102 223 - -
Aed2g2563 381 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 251 IPR004827 GO:0003700|GO:0006355
Aed2g2563 381 SUPERFAMILY Leucine zipper domain 199 249 IPR046347 GO:0003700|GO:0006355
Aed2g2563 381 Gene3D - 198 253 - -
Aed2g2563 381 MobiDBLite consensus disorder prediction 366 381 - -
Aed2g2563 381 Pfam bZIP transcription factor 198 250 IPR004827 GO:0003700|GO:0006355
Aed2g2563 381 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Aed2g2563 381 SMART brlzneu 195 259 IPR004827 GO:0003700|GO:0006355
Aed2g2563 381 Coils Coil 257 277 - -
Aed2g2563 381 MobiDBLite consensus disorder prediction 148 173 - -
Aed2g2563 381 PANTHER BZIP TRANSCRIPTION FACTOR 1 370 - -
Aed2g2563 381 MobiDBLite consensus disorder prediction 351 381 - -
Aed2g2563 381 Pfam Basic leucine-zipper C terminal 266 377 IPR020983 -
Aed2g2563 381 MobiDBLite consensus disorder prediction 102 138 - -
Aed2g2563 381 PANTHER BASIC LEUCINE ZIPPER 63 1 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2563 Aed-Chr2 28111715 28114651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2563 1 288 bZIP Transcription Factor Family AT4G02640 37.994 2.30e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed2g2563 bZIP_C 1.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2563 K25784 - gmx:778137 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2563 2 28111715 28114651 Aed2g2563 2 28111715 28114651 ECH
Aed2g2563 2 28111715 28114651 Aed8g1839 8 23104297 23107666 PCT