Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2560 ATGGAGTTTCCTCCGAACCTGTTGCCGGACGAGGCAAGCCCAGAATGGATGAACAAAGGAGACAATGCATGGCAGTTAATGGCAGCAACAGTGGTGGGTCTCCAAAGCATTCCGGGGCTGGTCATTCTCTATGGAAGCCTAGTGAAGAAGACGTGGGCCATTAACTCCGCTTTCATGGCCTTCTATGCCTTCACGGCAGTTCTTCTTTGCTGGGTCGCCTGGGGTTTCCGCATGTCGTTCGGCGAGAAAATGGTGTTCTTCTTGGGGAAACCGGGGATGGCGCTGGACGACAAGTTTCTTCTGGGGAAAGCTTTTCTGGGATTCTTTCCCACCGCTACGATGGTGTTCTATCAGGGCGTGTTTGCGGGGATTACTTTGATCTTGATAGCTGGGGCGTTACTCGGGAGGATGAACTTTCGTGCTTGGATGATCTTTGTGCCACTTTGGCTTACTTTTTCTTACACCGTCACCGCCTTTAGTATTTGGTGCCCCAATGGCTGGTTGTCAAAGCTTGGACTCATTGACTTCTCTGGTGGATATGTTATTCACCTCTCTGCCGGAGTTGCTGGTTTCACTGCTGCTTATTGGGTGGGTCCACGAGCTGAGAAGGAGAGACAAATGTTTGCATTAAAATCAAACAACATGATTTTGGCGCTTGCAGGCGCGGGCCTACTTTGGATGGGTTGGAGTGGGTTCAACGGTGGAGGTCCCTTCGTGGCCAGCACGGTTGCATCTCTGGCCGTCCTTAACACACACGTGTGTGCTTCCGCTAGCATAATCGTGTGGATCCTACTTGACACTTTCTACTTTGGTAAGCCCACCGTGTTCGGCGCCGTACAGGGCATGATCACTGGACTCGTTTGCATCACACCTGCCGCAGGAGTTGTGCAGGGCTGGGCTGCGATTTTGATGGGTGTGATCTCAGGAAGCGTTCCATGGTACACAATGATGGTCCTCCATAACAAGCTCCCCCATTTCCTGAAGCAAATCGACGACCCCATGGCGGTGTTCCACACCCACGCCGTCGCCGGAGCACTCGGGGGAATCCTCACCGGCCTCTTCGCCGTGCCAAAACTGTGCCGTCTCTTCTACATGGTCCCCGATTGGGAAAAATACATCGGCCTCGCCTATGGCCTCCAAAACGGTGCAACTCATGCGGGTTTAAGACAAATGGGCATCCAAGTCGGGGCCATGGTTTTTGTTATCGTCTTCAACTTGGTTACGACTAGTTTGATTTGCTTGCTGGTGGGGTCCATAGTACCACTCAGGATTGACAGTGACACCGATGCGTTGCAAATGATGCATGGTGACAAGGCAATGCATGGAGAAGAGGCTTTCGCTTTCTTGTATGGGGATCAGCCATCAAAGTTTGACAACCTCGTCAAGCAGCAGTACAGCAATAAAGTTTATGATACTCAAGACTTTTCGTTCGTTGGAGACACAACCTCGTTAGCCCACCTTCAAATAGTATAA 1473 0.5139 MEFPPNLLPDEASPEWMNKGDNAWQLMAATVVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFTAVLLCWVAWGFRMSFGEKMVFFLGKPGMALDDKFLLGKAFLGFFPTATMVFYQGVFAGITLILIAGALLGRMNFRAWMIFVPLWLTFSYTVTAFSIWCPNGWLSKLGLIDFSGGYVIHLSAGVAGFTAAYWVGPRAEKERQMFALKSNNMILALAGAGLLWMGWSGFNGGGPFVASTVASLAVLNTHVCASASIIVWILLDTFYFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGVISGSVPWYTMMVLHNKLPHFLKQIDDPMAVFHTHAVAGALGGILTGLFAVPKLCRLFYMVPDWEKYIGLAYGLQNGATHAGLRQMGIQVGAMVFVIVFNLVTTSLICLLVGSIVPLRIDSDTDALQMMHGDKAMHGEEAFAFLYGDQPSKFDNLVKQQYSNKVYDTQDFSFVGDTTSLAHLQIV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2560 490 PANTHER AMMONIUM TRANSPORTER MEP2 1 489 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed2g2560 490 PANTHER AMMONIUM TRANSPORTER 1 489 - -
Aed2g2560 490 Gene3D Ammonium transporter AmtB like domains 8 459 IPR029020 -
Aed2g2560 490 SUPERFAMILY Ammonium transporter 16 424 - -
Aed2g2560 490 Pfam Ammonium Transporter Family 23 445 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed2g2560 490 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005887
Aed2g2560 490 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005887
Aed2g2560 490 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005887
Aed2g2560 490 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2560 Aed-Chr2 28096650 28098122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2560 112 478 Inorganic Solute Cotransporters AT2G38290 51.771 8.19e-115 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2560 K03320 - gmx:100782944 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2560 2 28096650 28098122 Aed2g2560 2 28096650 28098122 ECH