Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2552 ATGGGGAAGGCAAGCAAATGGATCAGAAACTTCCTTCTGGGGAAAAAGGAAGAGAAAATCAAGAAGATCGATGCATTCTGCTTCGCCGCGGCCGCTGCCGAGGATAGGAGTCTGATTCCCAAAGTGAAGCGCAGATGGAGCTTCGGAAAACTAACAGGCAAGGTAGTAGGCCATAAATTTTCCAGATCTTTTGACTCAGGTGACACTGCCAAACTTCAAATACAAACCTTGTTGGAAACCAAGACTCCAAGGCGTCTTCTTCCAAAACCACTAACAAAGGCTTCTTCTAAAGATAAAAGCAGAGCCGCTACAAAGATTCAGGCTAACTTTCGGTCATATTTGGCAAGGAGAGCATTGCATGCTTTAAGGGGATTAGTGAAGTTACAGGCACTGGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCTACACTGCGTGGCATGCATGCGTTGATGGCCATACAAGTTAGAGCCCGAATTCACAGAATTCAGATGGCTGAGGAACCAAACCGACTTCCATACTTATTAACAGAACAAAATCAAGATTCAAACAAAATGAGTGTGGAAGAAATGTTGGAGGTTTTGAAAAGAAGAAGTGGGCCACTAGATGATGTTTCATATTCGAAGCAGAATGTGCCAGTTTTTGTTTCTAAACGAGAAAACCAAAAGAAGAAAAGTCTAATAATAGAAGGAAACAGCCGGGCCATATCTGAATTGAACCCAACGACAATTGGCTTGTCAACTTCTCAGCGGCAATCAGTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAAGCACGGTCGCAGAGTGAACCAAGACAACGACCCAAACAGGGGGGAGGGAGACACAAAGGCAAGTCTGTGGAATCCTCCCCCCCATTGAATGGTCCAAGACAAAATCTATTCTCAAACTCGTTACGCTTCGATCATGGAAGCATGGACCATTGGGTTATCAATTTACATGGCTCAATGGACAGCAGGCGCGATTCCTTTGGCAGCAGCTCGGTTACTACTGATTCTTATTATTGA 1038 0.4432 MGKASKWIRNFLLGKKEEKIKKIDAFCFAAAAAEDRSLIPKVKRRWSFGKLTGKVVGHKFSRSFDSGDTAKLQIQTLLETKTPRRLLPKPLTKASSKDKSRAATKIQANFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRIQMAEEPNRLPYLLTEQNQDSNKMSVEEMLEVLKRRSGPLDDVSYSKQNVPVFVSKRENQKKKSLIIEGNSRAISELNPTTIGLSTSQRQSVSPNYMNKTESSRAKARSQSEPRQRPKQGGGRHKGKSVESSPPLNGPRQNLFSNSLRFDHGSMDHWVINLHGSMDSRRDSFGSSSVTTDSYY 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2552 345 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Aed2g2552 345 Pfam IQ calmodulin-binding motif 126 140 IPR000048 GO:0005515
Aed2g2552 345 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Aed2g2552 345 MobiDBLite consensus disorder prediction 240 309 - -
Aed2g2552 345 MobiDBLite consensus disorder prediction 295 309 - -
Aed2g2552 345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 141 IPR027417 -
Aed2g2552 345 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 333 - -
Aed2g2552 345 Pfam Protein of unknown function (DUF4005) 240 300 IPR025064 -
Aed2g2552 345 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Aed2g2552 345 PANTHER IQ-DOMAIN 5-RELATED 1 333 - -
Aed2g2552 345 SMART iq_5 121 142 IPR000048 GO:0005515
Aed2g2552 345 SMART iq_5 98 120 IPR000048 GO:0005515
Aed2g2552 345 MobiDBLite consensus disorder prediction 240 266 - -
Aed2g2552 345 Gene3D - 96 151 - -
Aed2g2552 345 MobiDBLite consensus disorder prediction 267 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2552 Aed-Chr2 28065120 28066318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2552 1 315 IQD Protein Family AT4G14750 33.432 1.44e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2552 - - gmx:100527816 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2552 2 28065120 28066318 Aed2g2552 2 28065120 28066318 ECH