Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2551 ATGCCGAAAGAAAGAGCTTCTATTTCTGCTGCTCCAACAACGATGTCGTTTTGCACTAACCCTGCTAATGTACTAATAGAACATGCTCGTCCTTTGTACACAGGAGAGGGAAATCACTCGCTGATTGATGATATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCTTTTGGGTCTGCTCTTCTTGTGAAGCATAAGCATGAGAAGAAAAAATATGTGCTGAAGAAGATTCGCCTTGCCCGCCAAACTGAGCGCTCTCGTAGGTCTGCACACCAGGAGATGGAGCTCCTCTCCAAATTAAGAAATCCATTTATTGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTACGTGTGCATTATTATAGGTTATTGTGAGGGCGGAGACATGGCGGAAGCTATTAAGAAAGCTAGTGGTGTTATGTTTCCTGAGGAGAAACTATGTAAGTGGCTTGTTCAACTTCTTATGGCACTTAATTACTTGCACGTGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCATGACATTCGCCTTGGTGATTTTGGGCTTGCCAAAATGTTGACATCAGATGATCTGACTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGCTCTAAATCAGATATTTGGTCCTTGGGATGTTGTATATATGAAATGACCTCGCTTAAGCCAGCATTCAAAGCATTTGATATACTAGCCTTGATTCACAAGATTAATAAATCCATAGTGGCTCCATTGCCAACAAAGTATTCTGGTGCATTTCGAAGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGGCCTAGTGCTGCAGAATTACTCGGGCACCAACATCTTCAACCTTATGTTCTTAAGGTCCATCTCAAAATCAATAGCCCAAGGCGAAGTACATTGCCAGGTCATTGGCCAGAATCCAACTACATGAAGAAAACTAGATTTTTGAAGTCAGAAGATGATCCTGTTTCCCTCTCTGGGTATAAGTGGCATTCTTTTAGCAAAGATCAGACTTCAAATCCTAGTGTATCAGGAGCAGAGCAAGATTCTCTATGTTCTACACTAGAGATAGATTGCACTCCTGATAATTTAAACCAAAGATTTGCTGAACTTTCTGTTGGAGACAACCACGATCTGAAGTCACTCCATAAGGCGGCTGTTTCCAGAACTTCTAATGCCAAGACTCCTAAACTAACTGCATCAAAAGCTTCTGCCACCCCCAAGAAATCAATGGTATCCTCAAAGAATCATAAGACGCTTCCTGTTTCACACAATACGAGACAACCTGTCCATGCAACTCGCAGAGCATCATTGCCGTTCCCAAGAAGTTGTGCCATACAGCAGCCTCCTCGCAGGCCCAGTATTGGTTTACTTGACCATGTAAATTCACCCAATATTTCAGTTAACGCTCCCCGTATTGATAGAATAGCAGAATTCCCATTAGCATCATATGAAGACCAATTGTTTCCCATAAATAGATCTTCACCAAACTCGGCAAATGATTCAACTTTGATAGACAAATGCACAATCAAGGTATGTGACACATCCTATGTTAGGCCAGGCCGTATGGATGCTTGGCAGGGAATCAAACGCAGCATGTTCAAGAAAAACGATGAGGATAAAAGTGGCTCATCTGATCAAAATGCAACTGCTGGAGCCTCAAGCCACAACTCTTCAGACCTGTGCAGCCGACAGTTTGATACTTCATCATTCCAACAAAGGGCTGAGGCCTTAGAAGGTTTGCTTGAATTTAGTGCTAGATTACTACAGCAAGAAAGGTATGGAGAACTTGGAGTTTTATTAAAACCGTTTGGGCCAGGGAAAGCTTCCCCGAGGGAAACCGCTATTTGGTTGAGCAAGAGTTTAAAAGAGAACACTTTCAACCGGGAACAATCAACCTAA 1965 0.4219 MPKERASISAAPTTMSFCTNPANVLIEHARPLYTGEGNHSLIDDMEQYEILEQIGKGAFGSALLVKHKHEKKKYVLKKIRLARQTERSRRSAHQEMELLSKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKASGVMFPEEKLCKWLVQLLMALNYLHVNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSLKPAFKAFDILALIHKINKSIVAPLPTKYSGAFRSLVKSMLRKNPELRPSAAELLGHQHLQPYVLKVHLKINSPRRSTLPGHWPESNYMKKTRFLKSEDDPVSLSGYKWHSFSKDQTSNPSVSGAEQDSLCSTLEIDCTPDNLNQRFAELSVGDNHDLKSLHKAAVSRTSNAKTPKLTASKASATPKKSMVSSKNHKTLPVSHNTRQPVHATRRASLPFPRSCAIQQPPRRPSIGLLDHVNSPNISVNAPRIDRIAEFPLASYEDQLFPINRSSPNSANDSTLIDKCTIKVCDTSYVRPGRMDAWQGIKRSMFKKNDEDKSGSSDQNATAGASSHNSSDLCSRQFDTSSFQQRAEALEGLLEFSARLLQQERYGELGVLLKPFGPGKASPRETAIWLSKSLKENTFNREQST 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2551 654 MobiDBLite consensus disorder prediction 407 451 - -
Aed2g2551 654 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 45 639 - -
Aed2g2551 654 MobiDBLite consensus disorder prediction 557 582 - -
Aed2g2551 654 Gene3D Transferase(Phosphotransferase) domain 1 128 315 - -
Aed2g2551 654 Pfam Protein kinase domain 48 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2551 654 PANTHER SERINE/THREONINE-KINASE NEK4 45 639 - -
Aed2g2551 654 ProSiteProfiles Protein kinase domain profile. 48 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2551 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Aed2g2551 654 MobiDBLite consensus disorder prediction 565 582 - -
Aed2g2551 654 SUPERFAMILY Protein kinase-like (PK-like) 45 349 IPR011009 -
Aed2g2551 654 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Aed2g2551 654 Gene3D Phosphorylase Kinase; domain 1 28 127 - -
Aed2g2551 654 SMART serkin_6 48 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2551 654 CDD STKc_Nek 47 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2551 Aed-Chr2 28059439 28064880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2551 54 339 MAP Kinase Kinase Kinase AT1G53570 30.195 7.48e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aed2g2551 Pkinase 1.8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2551 K08857 - gmx:100796019 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2551 2 28059439 28064880 Aed2g2551 2 28059439 28064880 ECH
Aed2g2551 2 28059439 28064880 Aed8g1833 8 23061786 23070013 PCT