Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2544 ATGAATGAGTTTGAAACGGATTCCTCTCCATCTGAGTTCGTCGAAGTTGATCCAACTGGCAGATACGGCAGATACAATGAAATCCTTGGCAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAATTGTATGATTTTCTTCAGAGCCCCGAAGATCTCGAGAGGCTTTACTGTGAAATTCATCTCCTCAAGACGTTGAAGCACGGAAACATCATGAAATTTTACACATCTTGGGTCGATACTGCTAACAGGAATATCAACTTTGTCACTGAGATGTTCACTTCTGGCACCCTTAGACAGTATAGGCAAAAACACAAGAGAGTTAACATTAGGGCAGTGAAGCATTGGTGTAGACAGATCCTGAGAGGGCTTCTCTATCTTCATAGCCATGACCCACCTGTGCTCCATAGAGATCTTAAATGTGATAATATTTTTGTCAATGGAAACCAAGGGGAAGTTAAGATTGGGGACCTTGGCTTGGCAGCAATTCTCCGCAAGTCCCATGCTGCTCATTGCGTAGGAACGCCTGAGTTCATGGCGCCAGAAGTTTATGAAGAGTCATATAATGAATTAGTTGACATATATTCCTTTGGGATGTGTGTATTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGTAGCCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAGAAACCGGATGCCTTGTATAAAGTGAAGGATCCGGAAGTGCAACAATTTGTTGAGAAATGCCTGGCAACAGCGTCTCTAAGGCTCTCTGCAAGGGAGCTTCTAGATGATCCTTTTCTTCAGATTGATGATTACGAGTATGATTTGGGACTGGGGGACAGTGGAAGATTTGATGACTTGGGTCCTCTTACCCATCATCCATTCTTTGATCTCCACCGAAGCTATAGTAACATGAGTACTGAAAACTCAAATGGATTTGAATATGAAGGAGACTGGTATTCTCATCCAGCTGAGATTGAACCTAGTGGAATCGAACTTTTCGAGTGCCATGATGATGAAGCCTCTGAAGATGTTGACATAAGCATCAGAGGCAAGAGGAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCAGACAAAGAAGGCCATATTCGGAATATTTATTTCCCATTTGATGTAGAGACAGACACAGCATTAAGTGTGGCAACTGAAATGGTTGCAGAACTTGACATCACTGATCAGGATGTTACCAGTATAGCAGATATGATAGACGGGGAAATTGCTTCCTTGGTACCGGAATGGAAGTCAGGACCGGGAATTGAAGAAACTAACCATCATGTAAACAATTTTTTTTGTCACAATTGTGTGTCTAATCATACTTCTGGTGGCAATGTTATGGAATTTCTTTCACACAATCAAGGTGGAAAGAACTCGCAGCTTCCTCAATGCTGTAGGCATGGATGTACTTCAATGCATGGGCGTTTTGAGGAGATTACCTTCCCATCTGAGTGTGACAATCATGTTAGAGGGGATGCACCTATCAAATCAGACTGCTTGCAGTATCAGGAGTCATGGAATCATCATGAAAGTATTGAACTGAGTCCAGTAGAGTCTGATCAAAGTCACTCTGACGAGCAATATGAACAATTTGATAAACCAGTATTAGAAAAAGACAAAGAAAAGGGTATATGGGAAAACAGGTTTGCACATGATCCAGGAAACCCCCGACGAAGTTTATCAGGAAATTATTTCTCTGCATTCCGTTTGTTATGTTGTGGCCCTGAGAATGAATATGAGAAAGAGGTTCAACAAGAAATGAGATGGATCAAAGCAAAACACAAAATGGAGTCAAGGGATAAACGGTTTGGTATATCAGCAGCTAAATCTTCACATACTAGTAGCAGAGAGCACAAAACTGAACAAAGCATTATGCCACCACTGCCACAAACAGTAAACAGAGTGGACCACTTGCAACACTTGGGTAATTCCTGGAATTATGATTCCAGTTTCCGTTCTGACAAAGTAGAAGGTATGGTGACTAATGCAAAGAGTTTTTACACAGGGTCGCTTAGACATACTCTACACAGGACAGTTTCTCTTCCCGTTGATGCTGTGGATATATAA 2127 0.4133 MNEFETDSSPSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHGNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVLHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVISGKKPDALYKVKDPEVQQFVEKCLATASLRLSARELLDDPFLQIDDYEYDLGLGDSGRFDDLGPLTHHPFFDLHRSYSNMSTENSNGFEYEGDWYSHPAEIEPSGIELFECHDDEASEDVDISIRGKRKDDGGIFLRLRIADKEGHIRNIYFPFDVETDTALSVATEMVAELDITDQDVTSIADMIDGEIASLVPEWKSGPGIEETNHHVNNFFCHNCVSNHTSGGNVMEFLSHNQGGKNSQLPQCCRHGCTSMHGRFEEITFPSECDNHVRGDAPIKSDCLQYQESWNHHESIELSPVESDQSHSDEQYEQFDKPVLEKDKEKGIWENRFAHDPGNPRRSLSGNYFSAFRLLCCGPENEYEKEVQQEMRWIKAKHKMESRDKRFGISAAKSSHTSSREHKTEQSIMPPLPQTVNRVDHLQHLGNSWNYDSSFRSDKVEGMVTNAKSFYTGSLRHTLHRTVSLPVDAVDI 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2544 708 Gene3D Phosphorylase Kinase; domain 1 7 104 - -
Aed2g2544 708 SMART serkin_6 23 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2544 708 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2544 708 MobiDBLite consensus disorder prediction 624 639 - -
Aed2g2544 708 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 6 680 - -
Aed2g2544 708 MobiDBLite consensus disorder prediction 624 643 - -
Aed2g2544 708 SUPERFAMILY Protein kinase-like (PK-like) 26 281 IPR011009 -
Aed2g2544 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Aed2g2544 708 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 680 - -
Aed2g2544 708 ProSiteProfiles Protein kinase domain profile. 23 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2544 708 Gene3D - 370 442 - -
Aed2g2544 708 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 373 427 IPR024678 GO:0004674|GO:0005524
Aed2g2544 708 Gene3D Transferase(Phosphotransferase) domain 1 106 285 - -
Aed2g2544 708 CDD STKc_WNK 21 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2544 Aed-Chr2 28011681 28015922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2544 11 499 MAP Kinase Kinase Kinase AT3G22420 56.822 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed2g2544 Pkinase 4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2544 K08867 - gmx:100790554 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2544 2 28011681 28015922 Aed2g2544 2 28011681 28015922 ECH
Aed2g2544 2 28011681 28015922 Aed8g1824 8 22975814 22980297 PCT