Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2541 ATGGCTTCTCAGCAACACGATGTCGTTTTCCGCGAAGACATGGACGACGACGACGACGAATCTCAGGAGGACGAAGAGTACGAAGAAGACGACGACGTCTTGGCTGACGACGAGGAAAACGATCCCTCTCCCTCCGCCGCTCTCGCCGTCACCGTCGCCGTTCCCGGTTCCGCAGTTTCCAACGGCGTCGCCGCTCCAATTTCGACGCCCTCCGCTACCACCTTCGTCGTCGGTGACTCCTCCGATCCGAAGCGGCGGCGCGTGGAGCAAATCGAGGAGAAGAAGCCGCCGCCGCCGCTGCTTGACGACTCAAGGCGACTGTTTCAGCGGCTGTGGACCGACGAGGACGAGATCGAGCTCTTGCAAGGATTCCTCGACTACACGTCGCAGCGAGGATCCTCGCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAACCAGCTGGTGGAAAAGATCCGAAGGTTGAAGAAGAAGTACCGAAACGTCCTCAACAAAATTGGCTCTGGCAAGGAATTCTCCTTCAAGAGTGCTCACGATCAAGCCACCTTCGAAATCTCGCGCAAGATCTGGAGCATCGTGGCTCCAATCGGCGACAATTCCTTGGACGACGATGAAATCAACCCTAACCTTAATTTTAGCCCCGTGATGGTTAAGAACGAAATGGTTTTCAGGAATTCCGCGGAGAAGAAAACACCGAAACGCTCTCGGCCACGATCAGCGGCGGTGAAAATCGAGTCAAATGAAGGATCCGCGCCGAACAGAGATCATAATTGTATTGGCAATGCTACACCTACTGCTACTAACGCTACCACTACAGCAGCTACCACTAATAATAATTGTAACAGTGGTTATGGCAATAACATACCGAGTTTGATTGAGGAGACGGTGAGGAGTTGTTTGTCGCCTGTGTTGAAGGAGTTGGTGGCTGGAGCCATGGGTGGAGGAGGAGGAGCGTTTGGTGCGAGGGGGTTTTCGTTGAATTTGAACCCTATGCCTTTTATGAATTTGAGTAGTTTTGGCGGTGGGGAAATGGTGGATGCGAAATGGAGGAAGCAGCAGATATTAGAGTTGGAAGTGTATTCGAAGCGGTTGGAGCTGGTGCAGGATCAGATCAAGGCTGCTATGGAGGAGTTGCGGTCAAATGGAGGAGGAAGTTGA 1191 0.5256 MASQQHDVVFREDMDDDDDESQEDEEYEEDDDVLADDEENDPSPSAALAVTVAVPGSAVSNGVAAPISTPSATTFVVGDSSDPKRRRVEQIEEKKPPPPLLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSIVAPIGDNSLDDDEINPNLNFSPVMVKNEMVFRNSAEKKTPKRSRPRSAAVKIESNEGSAPNRDHNCIGNATPTATNATTTAATTNNNCNSGYGNNIPSLIEETVRSCLSPVLKELVAGAMGGGGGAFGARGFSLNLNPMPFMNLSSFGGGEMVDAKWRKQQILELEVYSKRLELVQDQIKAAMEELRSNGGGS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2541 396 MobiDBLite consensus disorder prediction 236 270 - -
Aed2g2541 396 PANTHER BNAANNG10740D PROTEIN-RELATED 1 393 IPR007592 GO:0006355
Aed2g2541 396 Coils Coil 156 176 - -
Aed2g2541 396 MobiDBLite consensus disorder prediction 74 102 - -
Aed2g2541 396 MobiDBLite consensus disorder prediction 12 39 - -
Aed2g2541 396 MobiDBLite consensus disorder prediction 80 102 - -
Aed2g2541 396 Coils Coil 368 392 - -
Aed2g2541 396 MobiDBLite consensus disorder prediction 236 252 - -
Aed2g2541 396 PANTHER BNAANNG10740D PROTEIN 1 393 - -
Aed2g2541 396 Pfam Protein of unknown function, DUF573 108 202 IPR007592 GO:0006355
Aed2g2541 396 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2541 Aed-Chr2 27996908 27998098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2541 45 394 GeBP Transcription Factor Family AT5G28040 49.072 1.67e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Aed2g2541 DUF573 1.6e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2541 - - gmx:100779712 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2541 2 27996908 27998098 Aed8g1819 8 22944313 22945368 PCT