Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2524 ATGGGGTGTGTGATTAGCAGGGAAGTGTCGAAGGGGATAATCTCTGAGGTGAAGGAGGAGAAGGGTTTGAGTGGTGAGAGTAAGAGGAAGGTTGATGGGGTGGCAGGGAGCAAAGGTGAGGTGGTAGAGGTTCAGAATGGTGAGAAGGAGAAGGAGAAGGGTGGTGAAGGGGTGCAGCGGCATCGAGGTGAAAGGAGAAGATCAAAGGCGAATCCGAGGCTGAGCAATCCGCCGAAGCATTTGAGGGGGGAGCAGGTTGCAGCTGGGTGGCCTCCTTGGCTCACTGCAGTGTGTGGGGAAGCACTCAGTGGCTGGATTCCACGAAAGGCCGACACCTTTGAGAAAATTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCTAAAGACATGATGACGTGTAAAATTGTTGCCCTAAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTAAAATTCATGGCGAGAGAAATTCTTATTTTGCGAAGGTTGGATCATCCAAATGTTGTAAAGTTGCAAGGTTTAGTTACGTCAAGGATGTCCTGTAGTTTGTATTTGGTGTTTGATTACATGGATCATGATTTGGCTGGACTTGCTGCAAGCCCAGGAATCAGGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAGCTGCTATCAGGACTTGAGCACTGTCATAACCGTAATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAACACTTAAGATTGCTGACTTTGGACTGGCTTCTATTTTTGATCCAAACCATAAGCATCCCATGACTAGCCGTGTAGTAACCCTTTGGTATCGACCTCCTGAGTTGCTTCTTGGTGCCACAGATTATAGTGTGGGTGTAGACCTCTGGAGTGCTGGATGTATTTTAGGAGAGTTATTGGCAGGGAAGCCAATCATGCCTGGTCGCACAGAGGTGGAACAATTGCACAAGATATACAAACTATGTGGTTCACCTTCCGATGAGTATTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCACGAGAGCCATACAAGAGACGCTTAAGAGAGACATTTAAAGATTTTCCACCATCTGCTCTACCCCTCATCGATACACTTCTTGCAATTGATCCTGTAGAACGGAAAACTGCCTCCGATGCTTTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCTAAATATCCACCGAGCAAGGAAATGGATGCTAAACGACGGGATGATGAAATGAGGAGAGTAAGAGCTTCAGGCAAAGCTCAGGCTGATGGTCCAAAGAAGCATCGTCCACGTGATCATGCTGCAAAAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGATCAGAGAAGACGTCTAATCACTCACGCAAATGCCAAGAGCAAGAGTGAAAAGTTCCCTCCACCACATCAAGATGGACAACTTGGTTTTCCTTTGGGATCTTCACATCACATTGATCCAGATACTGTTCCTAACGATGTTTCTTTTACATCAACCTCCTATACCTATTCAAAGGAACCATTCCATGCTTGGTCTGGTCCCATTGGTAATGGAGCTGACATTGGAGCATCAAAGCGAAAGAAACATACTGCAGGTGATGCATTGGATATATCAAAACCACGGAAAGATTCCCTCAAGAACAAGGTTAAAGGAAAGAAAATCATAGCTTAG 1731 0.4466 MGCVISREVSKGIISEVKEEKGLSGESKRKVDGVAGSKGEVVEVQNGEKEKEKGGEGVQRHRGERRRSKANPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMMTCKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMDHDLAGLAASPGIRFTEPQVKCYMHQLLSGLEHCHNRNVLHRDIKGSNLLIDNEGTLKIADFGLASIFDPNHKHPMTSRVVTLWYRPPELLLGATDYSVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRRLRETFKDFPPSALPLIDTLLAIDPVERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEMRRVRASGKAQADGPKKHRPRDHAAKAFPAPEANAELQSNIDQRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDTVPNDVSFTSTSYTYSKEPFHAWSGPIGNGADIGASKRKKHTAGDALDISKPRKDSLKNKVKGKKIIA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2524 576 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Aed2g2524 576 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2524 576 MobiDBLite consensus disorder prediction 17 36 - -
Aed2g2524 576 PANTHER CELL DIVISION PROTEIN KINASE 40 553 - -
Aed2g2524 576 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2524 576 SUPERFAMILY Protein kinase-like (PK-like) 108 404 IPR011009 -
Aed2g2524 576 MobiDBLite consensus disorder prediction 479 502 - -
Aed2g2524 576 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2524 576 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Aed2g2524 576 MobiDBLite consensus disorder prediction 539 576 - -
Aed2g2524 576 PANTHER OS01G0367700 PROTEIN 40 553 - -
Aed2g2524 576 MobiDBLite consensus disorder prediction 542 564 - -
Aed2g2524 576 MobiDBLite consensus disorder prediction 405 464 - -
Aed2g2524 576 MobiDBLite consensus disorder prediction 43 63 - -
Aed2g2524 576 MobiDBLite consensus disorder prediction 17 85 - -
Aed2g2524 576 MobiDBLite consensus disorder prediction 415 452 - -
Aed2g2524 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Aed2g2524 576 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Aed2g2524 576 CDD STKc_CDK9_like 113 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2524 Aed-Chr2 27876876 27882458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2524 105 488 Core Cell Cycle Gene Families AT5G10270 47.343 1.10e-123 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aed2g2524 Pkinase 3.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2524 K08819 - gmx:100786837 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2524 2 27876876 27882458 Aed8g1805 8 22828041 22835684 ECH
Aed2g2524 2 27876876 27882458 Aed2g2524 2 27876876 27882458 ECH
Aed2g2524 2 27876876 27882458 Aed8g1805 8 22828041 22835684 PCT