Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2522 ATGGGCGCACAGAAGAAAAGCGGCGCTAGGGTTTCAGAGGATCCCGATGAACTGGTGCGTGTTCCATTGCAGGCCATTCTCTTAGCCGATAGTTTCACCACGAAGTTCAGACCTATCACGCTCGAACGCCCCAAAGTGCTGCTTCCGCTGGTGAATGTTCCGATGATAAACTACACGCTGACTTGGCTCGAATCCGCTGGCGTCGAAGAGGTTTTTGTTTTCTGCTGTTCTCATTCCAAGCAGGTCATTAGCTACCTCGAGAAATCTGAGTGGTTATCTCAACCGAATTTCACCGTTACGACTATAGAGTCTCAGAACTCTGTCAGCGCCGGAGACGCGCTACGTGTAATCTATGAGCGCAATGTGATACATGGAGACTTTGTCCTTATTAGTGGAGATACTGTAAGCAATATGTCGCTTACTCAGGCACTTCTAGAGCATAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTCATGACTATGGTCATTAAACGGTCGAAACCTAATCCAGCTATCCATCAATCTCGACTTGGTACTGATGAACTTTTCATGGCCATTGATCCTAATACCAAGCAACTTCTGTATTATGAGGACAAGGCAGACCAATCAAAAGGAACCCTGCATCTTGACAAGTCATTGCTTGTTGATAATCCTTCACTCTCTCTGCATCATGACAAGCAGGATTGTTACATTGACATCTGTTCGCCCGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTACGGCGTCATTTTGTCAAGGGATTGCTTGTTGATGATATAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCAGACTATGCTGCAAGGATTGATAATTTCCGAAGCTACAACACTGTCAGCAAGGATATAATTCATCGATGGACATATCCACTAGTGCCAGATGTAATGAATTTTGGCAACACAGCTACTAAACTTGAACGCCAAGGAATGTACCGTGCTTCAGAAATATCACAATCACAGTCTGCTGTTATTGGCGCTTTCACTGTCATAGGATCTGGCACCAAAATTGGGAATAGCACTAAAATTTCAAATTCTGTTATTGGTGAAGGATGTAAAATTGGGTCAAATGTTATCATAGAGGGATGCTATATATGGGATAACATCAGCATAGAAGATGGCTGTAAACTCCAGCATGCAATTGTATGTGATGGGGTGATTATAAAGTCAGGGGCTGTTCTGGAACCTGGTGTTATTTTGTCTTTTAAGGTTGTAGTTGGGCCAGAGTTTGTTGTTCCTCCATATTCAAAAGTATCTCTATTTCAGCAGCCAATTGAGGAAGACAGTGATGAGGAACTTGAATATGCTGATAGTACTAGTGTCTTAGGCAGCCAAGTGGATAAATCAGATGTAGAAATTGCTTCCCAAGTATTGGTGACAAATTTTAGTCCTGCTTCGGAGCTAGGTATGGGTGGGGCTGGTCATGTTTGGTCAACATGTGAAGGCAGCCATGAAGAAGAGTGGAGGCATTCAGTTGAAGCAACCTTTCTCAGGGCTGTGCATGAAAACATACAAGAAAGCCATTTGATCTTAGAAATTAGTTCTTTGAAGTTATCATACAATAAGCTAACTGCTGATTGTGCTGGAGCTGTATTTTATGCCATGATGAAGAATGCTTTAGACACCCCCCATAGTTCCGCTGACGGTTTGCTTCAAAATGTTCAGGCTGTATTTACAAAATGGAAAAATGTTCTTACATCCTATCTGACTGACATAGATGAGCAGATTGAAGTAATACTAAAATTTGAAGAAATGTGTTCGGAATCAGCTAAGGAGTTTGCTCCTTTGTTCACAAAGATTCTGCACTACTTTTATAATGAAGATGTTGTAGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAAAAAGACGCTGTTGAGGCAGATAAAGTTTTTGTTAAGCAAGCCCAACAATTAATCCAATGGCTAAAAGAGGCTGAAGAAGACGATGATCAGGAATAG 1995 0.4145 MGAQKKSGARVSEDPDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCSHSKQVISYLEKSEWLSQPNFTVTTIESQNSVSAGDALRVIYERNVIHGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKPNPAIHQSRLGTDELFMAIDPNTKQLLYYEDKADQSKGTLHLDKSLLVDNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSDYAARIDNFRSYNTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGMYRASEISQSQSAVIGAFTVIGSGTKIGNSTKISNSVIGEGCKIGSNVIIEGCYIWDNISIEDGCKLQHAIVCDGVIIKSGAVLEPGVILSFKVVVGPEFVVPPYSKVSLFQQPIEEDSDEELEYADSTSVLGSQVDKSDVEIASQVLVTNFSPASELGMGGAGHVWSTCEGSHEEEWRHSVEATFLRAVHENIQESHLILEISSLKLSYNKLTADCAGAVFYAMMKNALDTPHSSADGLLQNVQAVFTKWKNVLTSYLTDIDEQIEVILKFEEMCSESAKEFAPLFTKILHYFYNEDVVEEDAILSWEDEKKDAVEADKVFVKQAQQLIQWLKEAEEDDDQE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2522 664 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Aed2g2522 664 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058|GO:0016779
Aed2g2522 664 Gene3D Hexapeptide repeat proteins 317 437 - -
Aed2g2522 664 SUPERFAMILY ARM repeat 500 658 IPR016024 -
Aed2g2522 664 Pfam Bacterial transferase hexapeptide (six repeats) 340 372 IPR001451 -
Aed2g2522 664 Pfam eIF4-gamma/eIF5/eIF2-epsilon 585 664 IPR003307 GO:0005515
Aed2g2522 664 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 15 303 IPR029044 -
Aed2g2522 664 SMART 542_3 573 660 IPR003307 GO:0005515
Aed2g2522 664 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 369 IPR029044 -
Aed2g2522 664 ProSiteProfiles W2 domain profile. 493 664 IPR003307 GO:0005515
Aed2g2522 664 CDD W2_eIF2B_epsilon 495 662 IPR044123 GO:0005085|GO:0031369
Aed2g2522 664 Gene3D - 490 664 - -
Aed2g2522 664 CDD LbH_eIF2B_epsilon 341 419 - -
Aed2g2522 664 SUPERFAMILY Trimeric LpxA-like enzymes 267 429 IPR011004 -
Aed2g2522 664 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 501 663 - -
Aed2g2522 664 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 504 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2522 503 657 Eukaryotic Initiation Factors Gene Family AT2G34970 59.355 9.49e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2522 K03240 - gmx:100784894 1176.39