Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2507 ATGGGTTCTCTGAATATGCTTTCCAAAACCCTAAGTGCTTCGGAATCAATTGACGATTTTGGCGGATTCCGGTGTTTACGCCGTCGGCGAGGACGCTCCGCGAGAGGAACCTGGCAATGGCATGCCTTCGCACCTCACCAAACCAGAGACTCCGGAGAAATCGATTTGGAGAAAGAGAGAAGTGTGGCAACTCTAAGAGAACTCTTAGAAGACTGCATTAGGGACTCCGGAGAAATCAATTTGGGGAAAGAGAAAAGTGTGGTAACTCTAAGAGAACTCTTAGAAGACTACATTAGGGACACTGACAACTCTCATCAACCACCTGAATTGGCTGTTAGTTGTCCAAGCTTAAGGACACGATTTCACTGGAGCAAGTTTTTTAAGCAATGGAAAACAAGATCAATTAAGCACCTACCATCTTTTCCTCCAAGTTGCGTCAGCAAAAGCATTGGAGAAACTTCTGTTATATGTAATCCAAACAGTTCCAGAACTTTGGTGAATTTCAGTCTCTCAGACTTGAGAAGTGCAACCAATAATTTTAGCAACGAGAATATAATTGGAAGAGGTGGGTTTGCTGATGTTTACAAGGGTAGCCTCCAAGATGGGCAACTAATAGCAATTAAGCAACTGAATAAAGGGACTCCAGAAAACATAACATCAAACTTTCTATCTGAGCTGGGCATTCTTGCTCATGTTGATCATCCTAATACTGCCAAGCTTATTGGATGTGGAGTAGAAGGAGGAATGCACCTTGTCTTCGAACTATCTCCACTGGGAAATTTAGGGTCTCTTCTTCATGGTGTGCACTTGATTTGTGATTTTGGACTTGCAAAATGGTTACCAGAACCGTGGACTCATCGTAATGTGTCAAAATTTGAAGGCACAATGGGGTATTTTGCTCCTGAGTATTTGATGCATGGCATCGTAAACGAGAAAACGGATATTTATTCCTTTGGAGTCCTGCTTTTGGAGGTTATAACTGGCCGTCTTGCTTTGGATCATTTGCAAGAAAGTATTTTATTATGGGCAAAGCCTCTATTTGAAGCCAATGATATCAAAGGCCTTGTTGATCCTTCTCTGGGTGATGATTATGACCGGGAACAAATGGATCGTGTTGTTTTGACTGCATCTCTGTGTGTTGAGCAGTTTCCTATCTTACGCCCCAGCATGAGTCAGGCAAATATGCAACCTAAAATGTTGCATTACTATAATCTTAATGAAAATCAACTAGGATATTGTTAG 1242 0.4187 MGSLNMLSKTLSASESIDDFGGFRCLRRRRGRSARGTWQWHAFAPHQTRDSGEIDLEKERSVATLRELLEDCIRDSGEINLGKEKSVVTLRELLEDYIRDTDNSHQPPELAVSCPSLRTRFHWSKFFKQWKTRSIKHLPSFPPSCVSKSIGETSVICNPNSSRTLVNFSLSDLRSATNNFSNENIIGRGGFADVYKGSLQDGQLIAIKQLNKGTPENITSNFLSELGILAHVDHPNTAKLIGCGVEGGMHLVFELSPLGNLGSLLHGVHLICDFGLAKWLPEPWTHRNVSKFEGTMGYFAPEYLMHGIVNEKTDIYSFGVLLLEVITGRLALDHLQESILLWAKPLFEANDIKGLVDPSLGDDYDREQMDRVVLTASLCVEQFPILRPSMSQANMQPKMLHYYNLNENQLGYC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2507 413 Pfam Protein tyrosine and serine/threonine kinase 183 266 IPR001245 GO:0004672|GO:0006468
Aed2g2507 413 PANTHER OS08G0249100 PROTEIN 271 395 - -
Aed2g2507 413 PANTHER OS08G0249100 PROTEIN 100 268 - -
Aed2g2507 413 ProSitePatterns Protein kinases ATP-binding region signature. 186 208 IPR017441 GO:0005524
Aed2g2507 413 Gene3D Transferase(Phosphotransferase) domain 1 251 398 - -
Aed2g2507 413 ProSiteProfiles Protein kinase domain profile. 180 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2507 413 Pfam Protein kinase domain 271 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2507 413 SUPERFAMILY Protein kinase-like (PK-like) 163 403 IPR011009 -
Aed2g2507 413 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 271 395 - -
Aed2g2507 413 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 100 268 - -
Aed2g2507 413 Gene3D Phosphorylase Kinase; domain 1 144 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2507 Aed-Chr2 27757697 27766818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2507 165 393 Receptor kinase-like Gene Family AT1G53420 35.540 8.69e-43 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed2g2507 Pkinase 4.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2507 - - gmx:113001177 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2507 2 27757697 27766818 Aed8g1792 8 22731367 22733694 ECH
Aed8g0776 8 6621416 6625443 Aed2g2507 2 27757697 27766818 ECH
Aed4g1868 4 22751409 22759169 Aed2g2507 2 27757697 27766818 ECH
Aed2g2507 2 27757697 27766818 Aed2g2507 2 27757697 27766818 ECH
Aed2g2507 2 27757697 27766818 Aed8g1792 8 22731367 22733694 PCT