Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2505 GAAATTTCAGTTTCACTCTGCAAATCCCTAATCTCACTAGATATAAAATCGAAACGAAAGGTGCCTCCATTTTTCCACTTTGCAAAGTTGCAGACGCAGAAGAAGGTTCATCTAATCTCGGAATACCTTCACATTGCAACTATGTCGAGGAGAAAGGTTAGAGAGCCAAAGGAAGAGAATGTGACTCTGGGTCCAGCTGTTAGAGATGGCGAACATGTTTTTGGCGTCGCTCGCATCTTTGCCTCCTTCAACGATACCTTCATTCATGTTACTGATCTGTCTGGGAGCGAAACACTGGTTCGCATCACCGGTGGAATGAAGGTTAAGGCTGATAGAGATGAATCATCTCCCTATGCTGCTATGCTTGCAGCTCAGGATGTTGCTACCAGATGCAAGGAACTGGGCATAACTGCTCTTCATATCAAGCTCCGTGCCACCGGTGGAAACAAGACAAAAACACCTGGTCCTGGTGCTCAATCAGCTCTTCGCGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGCATAGAGGATGTGACTCCCATTCCTTCAGATAGCACTCGTAGAAAGAGTGGTAGAAGGGGTAGAAGGCTTTAA 594 0.463 EISVSLCKSLISLDIKSKRKVPPFFHFAKLQTQKKVHLISEYLHIATMSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGSETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2505 197 MobiDBLite consensus disorder prediction 177 197 - -
Aed2g2505 197 Pfam Ribosomal protein S11 75 193 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aed2g2505 197 ProSitePatterns Ribosomal protein S11 signature. 162 184 IPR018102 -
Aed2g2505 197 PANTHER BNAA05G27530D PROTEIN 30 197 - -
Aed2g2505 197 Hamap 30S ribosomal protein S11 [rpsK]. 29 194 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aed2g2505 197 SUPERFAMILY Translational machinery components 70 195 - -
Aed2g2505 197 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 30 197 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aed2g2505 197 Gene3D Ribosomal protein S11 48 197 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2505 Aed-Chr2 27750169 27753791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2505 48 186 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 89.928 4.90e-91 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2505 K02955 K01000 gmx:100499665 264.233