Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2491 ATGAAGAAACACATAGACATAGCCCTCTTTCTCCTTGTGGTGTTAATCCCTATCGCCGTTGCGCAGGCCCCAGCCCCACCCAATGGCTTGAACGACTTCAGCCCCTCCATAGCCATAATCATAATCATACTAGTCGTCGCGCTTTTCCTCATGGCCTTCTTCTCCATCTACGTCCGCCACTGCGCCGATTCCCCATCCAACACCGTTAGGCCTCTCACTGCCGCCGCACGCTCCAGGAGAGCCGCGCGTGGCCTTGATCCCGACCTCATCCAAACATTCCCAATCCTCCAATACTCCGAGGTCAAGATCCACAAAATTGGAAAAGAAGCCCTCGAGTGCGCCGTTTGCCTTTGCGAGTTCGAGGACACTGAAACGCTGCGTTTGCTCCCCAAGTGCGATCATGTTTTCCACCCTGAGTGCATCGACGAGTGGTTGACTTCCCACACCACGTGTCCTGTCTGCCGCGCCAACCTCTCCCCAACCGATGCTGACGCTCTTGCCCTTCCGGTTCCTGAAATTTTAGCGCCAGACATCGAAGCCCAAAACGACGCCGTGGAAGCCGCGCCAGAGCCAGAGCAAGAACACGCGGATACTGACCGAGTCTTGTCTGAACCGGAAGTAATTCCCCTGGACAAAACGCTGAACCGGAACCGCACGCGAGGGTCACGCTCGAACCGTCCGCGCAGATTTCCTAGGTCGCACTCGACCGGCCACTCGCTGGTCCAACCGGGAGAAAACACGGACAAGTTCACTTTGAGGTTACCTTTGGAGGTGAGGAAGCAGCTAATAAACCGGCAATTGCAACGCGCGAGTAGCTTGATCGTGTTGCCGAGGGAAGGTAGTTCGAGGCTGGGATACAGAACCGGAGGAGAAGGGAGTAGTAGGGGGAAGACTTCCAGGCGGTTGGACCGGAGTTCGAGATCGGACCGGTCCATTTTCTCGATGGCTGCGCCCTTTTTCTCGAGGGCGTTGTCTATTAGGTCGCCTAGGGTTCGTAACAACGACGTTGAAGGGACGTCGTCGTCCTCCACCGCGCCTATCTTGCCGCCAACGGCCGTGGACTCGGCGGCTAGGCCTCCAGTTTAA 1086 0.5681 MKKHIDIALFLLVVLIPIAVAQAPAPPNGLNDFSPSIAIIIIILVVALFLMAFFSIYVRHCADSPSNTVRPLTAAARSRRAARGLDPDLIQTFPILQYSEVKIHKIGKEALECAVCLCEFEDTETLRLLPKCDHVFHPECIDEWLTSHTTCPVCRANLSPTDADALALPVPEILAPDIEAQNDAVEAAPEPEQEHADTDRVLSEPEVIPLDKTLNRNRTRGSRSNRPRRFPRSHSTGHSLVQPGENTDKFTLRLPLEVRKQLINRQLQRASSLIVLPREGSSRLGYRTGGEGSSRGKTSRRLDRSSRSDRSIFSMAAPFFSRALSIRSPRVRNNDVEGTSSSSTAPILPPTAVDSAARPPV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2491 361 Pfam Ring finger domain 112 155 IPR001841 -
Aed2g2491 361 MobiDBLite consensus disorder prediction 294 308 - -
Aed2g2491 361 SUPERFAMILY RING/U-box 112 160 - -
Aed2g2491 361 PANTHER RING FINGER DOMAIN-CONTAINING 1 301 - -
Aed2g2491 361 MobiDBLite consensus disorder prediction 184 246 - -
Aed2g2491 361 MobiDBLite consensus disorder prediction 188 218 - -
Aed2g2491 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 161 IPR013083 -
Aed2g2491 361 MobiDBLite consensus disorder prediction 332 349 - -
Aed2g2491 361 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Aed2g2491 361 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 301 - -
Aed2g2491 361 SMART ring_2 113 154 IPR001841 -
Aed2g2491 361 MobiDBLite consensus disorder prediction 219 233 - -
Aed2g2491 361 MobiDBLite consensus disorder prediction 282 308 - -
Aed2g2491 361 MobiDBLite consensus disorder prediction 332 361 - -
Aed2g2491 361 CDD RING-H2_EL5_like 112 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2491 Aed-Chr2 27648694 27649779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2491 7 345 Rapid Response to Elicitors AT3G05200 42.564 1.77e-83 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2491 K10664 - gmx:100781706 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2491 2 27648694 27649779 Aed8g1782 8 22678169 22679248 PCT