Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2473 TACAGTTCAGTTCTGTGGTTGCCGACGCAACGTCTCTCGCATCGCTCTTCACTCTCAGTCTCACAGAGAACACGAGAGAGAGATCACTATTCACCACAAATGCAAGACATTTTCGGATCAGTTCGCCGATCACTGGTATTCCGTGGTTCGCCGGAGAACGAAGAAGCGTCTCTCGGAGTGGGAGGAGGCCTCGTCGATAAGATCAGTTATTGTATCCGAAGTTCCAGAGTCTTCTCCAAACCCTCTCCGCCGCCGCCGTCGCCGTCCATTCCTAAGGACGCTGCGCCTCCGATCCGATGGCGGAAAGGCGAGTTGATCGGTTGCGGCGCCTTTGGCCAAGTCTACGTTGGAATGAATCTCGATTCCGGAGAGCTTCTGGCGGTTAAACAGGTCTTGATTGCGGCAAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACGTAAAAGAGCTTGAAGAAGAAGTTAAATTACTGAAAGACCTTTCACATGCCAACATTGTTAGATATTTGGGTACGGTCAGAGAAGAGGACACCCTAAATATTCTCCTCGAGTTTGTTCCTGGTGGATCCATATCATCACTATTGGGGAAGTTTGGGGCTTTTCCTGAGGCTGTAATAAGAACTTACACAAAGCAGCTACTACTTGGACTTGAGTATTTGCACAAAAATGGAATAATGCACAGGGACATTAAGGGGGCCAATATTCTTGTAGATAATAAAGGGTGCATAAAACTTGCAGACTTTGGGGCATCCAAACAGGTCGTCGAGCTGGCAACCATTTCTGGTGCCAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCAGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGACATATGGAGTGTGGGTTGTACTGTGATTGAGATGGCCACTGGAAAGCCTCCCTGGAGTCAGCAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAATCTCATCCGCCAATCCCTGATCATCTCTCAGCTGCAGCAAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAACCATATTTGAGGTCATCGGCATCAGAACTGCTGCAGCATCCCTTTGTTACCGGTGAACAAATGAATTCCCTTCCTCTGTCATCTAATGTCACGGAAAATTTTGAAGCTTCTTCACCATCATGTGCTCCAAATTCTGAATCCTTCCTTTGTTGTTCAACCGTAAATCCTCTGGACTCGGGGAATAAACAGTCATGGGGAATGAACAATGATGATGATGATATGTGTGTGATTGATGACAAAGAGTTCTCGCAGAGTGATGCCAAATACAAATCATTGATGTCAACTAATATTGAGAGTTTCAACCCAATGTCTGATCCCTCTGATGATTGGGGGTGTAAATTTGATGCAAGTCCAGAACTGGAAAATAGAGGGGCTCTTGAACTGAAAAAATTGCAGACACCTTTATATGAAGAGTTTTACAACAGTTTAAATACATCTTCTTCTCCCAATGTGATTGATAGCACAAGTGATGAAACTGCTTGTCGAAAATATTTGAAATTACCTCCTAAAAGCAGGTCACCAAGTCGGGTACCAATTAGCACTCCATCTAAAGCCGTTGATAATTCTGGAAGTCCAGGAAGTAATGGCCGGTCCTCATCAACTGTTGGCCATGTAAATAACCATAGTCCACAGGATATTCCAGCATCTCCCCTTAATGACTCTCAGCAGCAGCCATGTAGCCCAAGTCTAAGCTTTTCCGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAGCGAGAAATGATGCGGCAAGCTGGCATGGGCGGAAAGACATCTTCACCAAAGGATCGAGCTTTAAATCGGCAGAGGGAGCGAACAAGATTTGCTTCTCCCAGCAAATAA 1899 0.4581 YSSVLWLPTQRLSHRSSLSVSQRTRERDHYSPQMQDIFGSVRRSLVFRGSPENEEASLGVGGGLVDKISYCIRSSRVFSKPSPPPPSPSIPKDAAPPIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHANIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSAAAKDFLLKCLQKEPYLRSSASELLQHPFVTGEQMNSLPLSSNVTENFEASSPSCAPNSESFLCCSTVNPLDSGNKQSWGMNNDDDDMCVIDDKEFSQSDAKYKSLMSTNIESFNPMSDPSDDWGCKFDASPELENRGALELKKLQTPLYEEFYNSLNTSSSPNVIDSTSDETACRKYLKLPPKSRSPSRVPISTPSKAVDNSGSPGSNGRSSSTVGHVNNHSPQDIPASPLNDSQQQPCSPSLSFSERQRKWKEELDQELERKREMMRQAGMGGKTSSPKDRALNRQRERTRFASPSK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2473 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Aed2g2473 632 SUPERFAMILY Protein kinase-like (PK-like) 99 364 IPR011009 -
Aed2g2473 632 Gene3D Transferase(Phosphotransferase) domain 1 99 393 - -
Aed2g2473 632 MobiDBLite consensus disorder prediction 615 632 - -
Aed2g2473 632 Pfam Protein kinase domain 101 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2473 632 ProSiteProfiles Protein kinase domain profile. 100 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2473 632 SMART serkin_6 100 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2473 632 MobiDBLite consensus disorder prediction 512 632 - -
Aed2g2473 632 MobiDBLite consensus disorder prediction 581 603 - -
Aed2g2473 632 CDD STKc_MAPKKK 99 363 - -
Aed2g2473 632 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 34 387 - -
Aed2g2473 632 Coils Coil 583 603 - -
Aed2g2473 632 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Aed2g2473 632 Coils Coil 133 160 - -
Aed2g2473 632 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 34 387 - -
Aed2g2473 632 MobiDBLite consensus disorder prediction 521 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2473 Aed-Chr2 27557278 27562585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2473 34 632 MAP Kinase Kinase Kinase AT1G54960 56.889 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed2g2473 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2473 K20606 - gmx:100807537 1050.43