Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2448 ATGAGTCGAGGAGGTGCAGCAGCAGCGAAGGGAAAGAAGAAGGGTGCTACATTCACCATTGACTGTGCAAAGCCAGTAGAAGACAAGATCATGGACATTGCTTCTCTGGAGAAGTTTCTTCAAGAGAGGATCAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGACACTGTTACTGTTACCCGTGACAAGACCAAGATCATTCTCACCTCTGACACTAACTTCTCCAAACGGTATTTGAAGTACTTGACGAAGAAGTACTTGAAGAAACACAATGTGAGAGACTGGCTTAGAGTGATTGCTTCTAACAAGGATAGAAGTGTTTACGAACTGAGGTACTTCAACATTGCTGAGAATGAGGGAGAGGAAGAAGATTAG 375 0.4453 MSRGGAAAAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTRDKTKIILTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2448 124 Gene3D - 5 124 IPR038526 -
Aed2g2448 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Aed2g2448 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aed2g2448 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2448 Aed-Chr2 27384762 27385880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2448 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 85.484 2.09e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2448 K02891 - gmx:100305556 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2448 2 27384762 27385880 Aed8g1730 8 22327497 22329024 PCT