Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2443 ATGATGATGGCGACAATGGAGGGGGTGATGGACAAGGCGGTGTTGGAAGATGTGATTAGAAGGCTTCTGGAAGGAAAAGGAGGGAAACAGGTTCAGCTCTCTGAGTCGGAGATCCGTCAACTCTGCGTCAATGCCAGACAAATCTTCCTCTCTCAGCCAATTCTCCTTGACATCCGTGCTCCCATCCGCGTCTGCGGTGATATACATGGTCAGTACCAGGACTTGCTGAGGCTTTTTGAATATGGTGGCTACCCTCCTTCGGCAACCTATTTGTTTCTTGGGGATTATGTGGACAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCTTACAAAATAAGATATCCAGACAATGTTTATCTCTTGAGAGGAAACCATGAAGAAGCAAAGATAAACCGTATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACCGACTGCTTTAACTGTTTGCCAGTGGCTGCACTCATTGATGAGAAAATACTTTGTATGCATGGTGGACTCTCTCCCGAATTACAAAATTTAGATCAGATCAGGGAAATTCAAAGGCCTACTGAAATTCCAGATAGTGGCCTCCTATGTGATCTGCTTTGGTCTGATCCTGATGCTAGCATTGAGGGCTGGGCAGAGAGTGACCGAGGCGTTTCGTGTACTTTTGGAGCTGATGTAGTTGCCGAGTTTTTGGATAAAAATGACCTTGATCTTGTTTGCAGAGGGCATCAGGTTGTGGAAGATGGATATGAGTTTTTTGCTAAAAGAAGATTAGTCACGATATTTTCTGCTCCAAATTATGGTGGGGAATTTGACAACGCTGGTGCATTGTTAAGCGTTGATGATTCTCTTGTATGTTCCTTTGAGATATTGAAACCCGCTGATAGAGCACCAGGAAGTAGTTCAACGAAAATGAATTTTAAGAAGATTCGCGTGTTGATTGAGTTGACACGGCTTACTTCAATGCTTAAAAATTTGGGACACGAGCCCAAAGTCGAGGCTGAGAGGGATAGGTCACTGGGGAGGAAATGGTCAATGAGATGTGGACTCTGTTATGTGCAGTTTTGTAGTAGAAGTAGCTGGAATGCAAGGATATGGATCATTGTACCCCGCTCCCACTACATACAGATTCAGAATCCCCCTTCACTCTCGTCTGCCCGCACCGCAATTTTAGTTTAA 1203 0.4372 MMMATMEGVMDKAVLEDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDIRAPIRVCGDIHGQYQDLLRLFEYGGYPPSATYLFLGDYVDRGKQSLETICLLLAYKIRYPDNVYLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELQNLDQIREIQRPTEIPDSGLLCDLLWSDPDASIEGWAESDRGVSCTFGADVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRAPGSSSTKMNFKKIRVLIELTRLTSMLKNLGHEPKVEAERDRSLGRKWSMRCGLCYVQFCSRSSWNARIWIIVPRSHYIQIQNPPSLSSARTAILV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2443 400 Pfam Calcineurin-like phosphoesterase 61 253 IPR004843 GO:0016787
Aed2g2443 400 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Aed2g2443 400 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Aed2g2443 400 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Aed2g2443 400 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Aed2g2443 400 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Aed2g2443 400 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Aed2g2443 400 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Aed2g2443 400 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 316 - -
Aed2g2443 400 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Aed2g2443 400 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 316 - -
Aed2g2443 400 Gene3D - 7 308 IPR029052 -
Aed2g2443 400 SUPERFAMILY Metallo-dependent phosphatases 15 304 IPR029052 -
Aed2g2443 400 SMART pp2a_7 33 303 IPR006186 GO:0016787
Aed2g2443 400 Pfam Serine-threonine protein phosphatase N-terminal domain 15 58 IPR031675 -
Aed2g2443 400 CDD MPP_PP1_PPKL 14 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2443 Aed-Chr2 27354223 27358080 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2443 56 249 Calmodulin-binding Proteins AT5G63870 33.624 5.64e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2443 K06269 - gmx:100805030 628.632