Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2442 ATGTTCTACATTTGTCTGAGCCTCAGCACCATGCTTCACTTTATTCTTTATCGATTCCTTGTTCGAAGGACTGACAGCAATTTCAATGCTGTGATACTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCAATTTCTTTGTCAAGGTTGATTAAGTATACTAAGGGGAAGGAAGATAAAATTACTGTTGTAGTGGGGACTGTAACTGATGATATCAGAGTATATGAAGTTCCAGCATTGAAAGTTACGGCACTTAAGTTTACAGAGAGAGCACGTGCAAGAATAGAAAAGGCAGGTGGTGAATGCTTGACATTTGATCAGCTTGCCCTTAGGGCTCCTTTGGGACAAAATACGGTTCTACTAAGAGGCCCCAAGAATGCTCGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCATACCAAACCCTATGTACGATCCAAGGGAAGAAAGTACGAGAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAAAGTTTAA 516 0.4322 MFYICLSLSTMLHFILYRFLVRRTDSNFNAVILKRLFMSKVNKPPISLSRLIKYTKGKEDKITVVVGTVTDDIRVYEVPALKVTALKFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKYERARGRRNSRGFKV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2442 171 MobiDBLite consensus disorder prediction 135 171 - -
Aed2g2442 171 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 13 170 - -
Aed2g2442 171 SUPERFAMILY Ribosomal proteins L15p and L18e 14 123 IPR036227 -
Aed2g2442 171 Gene3D - 8 171 - -
Aed2g2442 171 PANTHER 60S RIBOSOMAL PROTEIN L18 13 170 IPR000039 GO:0003735|GO:0005840|GO:0006412
Aed2g2442 171 Pfam Ribosomal protein 60S L18 and 50S L18e 14 171 IPR021131 -
Aed2g2442 171 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2442 Aed-Chr2 27346958 27348741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2442 18 171 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.065 2.93e-85 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2442 K02883 - gmx:100813255 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2442 2 27346958 27348741 Aed2g2442 2 27346958 27348741 ECH