Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2432 ATGATACATTCGAGGGGCACCGACTGGAATGAAATGCGTGGAGCTTCTGCTGCTGCTAAATTGAAAAGGATGGCGGGAGATGCACAGAATAAAAGAATCGCCATCATTGGCGTTTCTATCTTCTTGCTAGTGGCCATGGTGGTGGCTGTGGCCGTTAGCGTAAGCATCAATAACAAGGGATCAATGAGTGATGAAAAGGAAGAAAGCAATTCGCATGTAGCCTCCTCGATGAAAGCCGTGAAAACCCTCTGCGCACCCACCGAATATCAGAAGGAATGCGAGGAGAGTCTGAGTGCAAACTCCGGCAACACCACCGACCCACGAGAACTCATAAAAATTGCCTTCCATTTGACCATCTCCAGAATCGGTGAAGGACTCGAGAAAACCCAACTGATGCACGAGGTGGAGAGCGACCCTAGAACCAAGGAGGCTCTGGACACGTGCAAGCAACTCATGAACCTCTCCATCGGGGAGTTCACGAGGTCGGTCGATAAGCTCGCCAAGTTCGACCTCAGCAACCTCGACAACATCCTCACCAGTTTGAAGGTTTGGCTCAGCGGTGCAATCACGTACCAAGACACTTGTTTAGACGCCTTCGACAACACAACCACCGACGCTGGTAAGAAAATGCAGGAACTCCTTCAAGCCGGCATGCACATGAGCAGCAATGGCCTCGCTATCATCAACGAGTTGTCGAAAACTCTCTCGGAAATGCACGTTGGCAAAACCGGGCGTCGACGCCTCTTCAGCTCCGGTGACCACTTCCATATGCCCGATTGGGTTGATAACCGCGCCGGTGTTCGCAGACTCCTACGTATGACTGGACGAAAACACATGGCGCACGTGGTTGTTGCCAAGGATGGTAGCGGAAACTTCACCACCATCAACGAGGCGTTGAAGCACGTGCCGAAGAAGAACCTAAGGCCATTCGTTATTTACATTAAGGAGGGTGTTTATGACGAGTACGTGGAAGTTTCCAAGAATATGACTCATGTCGTTATGATTGGTGATAGTGGCAAGAAGACAAGGATCACCGGTAGCAAGAACTACGTCGATGGGGTTGGGACCTACAGAACCGCGAGTGTAGCCATTCTTGGAGATTTCTTCGTTGGCATAGGTATGGGGTTTGAGAACACGGCCGGTGCTGCAAAACATCAAGCAGTGGCATTGAGGGTTCAATCTGACAGGTCCATCTTTTACAAATGCCGCATGGATGGGTACCAAGACACACTCTACGCCCACGCCATGCGTCAATTCTACCGCGATTGTGTCATTTCAGGAACCATCGACTTTGTCTTTGGTGATGCAGTGGCTGTTCTCCAAAACTGCACTTTCGTGGTCCGAAAACCATTGGAAAACCAGCAATGTATTGTGACCGCACAAGGCAGGAAAGAGACGAACCAACCATCGGGTTTGATCATCCAAGGAGGGAGTATTGTTTCGGATCCCAAGTACTACCCAGTCAGGTTCGACAACAAAGCCTACTTGGCTCGTCCATGGAAGAATTTCTCAAGGACCATTATCTTGGACGCGTACATTGGTGATTTGATCACTCCCGATGGTTATATGCCATGGCAAACAGTTAATGGTTCAACCGGAATGAACACATGTTTCTATGCTGAGTTCAACAACCGTGGACCTGGTTCAGACATATCCAAGCGCGTCAAATGGGAAGGAGTTAAGACACTCGATTCAGATGTAGTAGCAGCTTTCTATCCATCAGAGTTCTTCAAGGGAGATGACTGGATTAGGGTTACAAGGGTTCCTTACTTCCCCGGCCTCCCCCATTAA 1791 0.4953 MIHSRGTDWNEMRGASAAAKLKRMAGDAQNKRIAIIGVSIFLLVAMVVAVAVSVSINNKGSMSDEKEESNSHVASSMKAVKTLCAPTEYQKECEESLSANSGNTTDPRELIKIAFHLTISRIGEGLEKTQLMHEVESDPRTKEALDTCKQLMNLSIGEFTRSVDKLAKFDLSNLDNILTSLKVWLSGAITYQDTCLDAFDNTTTDAGKKMQELLQAGMHMSSNGLAIINELSKTLSEMHVGKTGRRRLFSSGDHFHMPDWVDNRAGVRRLLRMTGRKHMAHVVVAKDGSGNFTTINEALKHVPKKNLRPFVIYIKEGVYDEYVEVSKNMTHVVMIGDSGKKTRITGSKNYVDGVGTYRTASVAILGDFFVGIGMGFENTAGAAKHQAVALRVQSDRSIFYKCRMDGYQDTLYAHAMRQFYRDCVISGTIDFVFGDAVAVLQNCTFVVRKPLENQQCIVTAQGRKETNQPSGLIIQGGSIVSDPKYYPVRFDNKAYLARPWKNFSRTIILDAYIGDLITPDGYMPWQTVNGSTGMNTCFYAEFNNRGPGSDISKRVKWEGVKTLDSDVVAAFYPSEFFKGDDWIRVTRVPYFPGLPH 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2432 596 Pfam Plant invertase/pectin methylesterase inhibitor 79 227 IPR006501 GO:0004857
Aed2g2432 596 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 233 IPR035513 -
Aed2g2432 596 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 232 IPR035513 -
Aed2g2432 596 Gene3D - 276 594 IPR012334 -
Aed2g2432 596 SMART PMEI_2 75 227 IPR006501 GO:0004857
Aed2g2432 596 ProSitePatterns Pectinesterase signature 2. 425 434 IPR033131 -
Aed2g2432 596 PANTHER PECTINESTERASE 33 594 - -
Aed2g2432 596 SUPERFAMILY Pectin lyase-like 281 593 IPR011050 -
Aed2g2432 596 PANTHER PECTINESTERASE 33 594 - -
Aed2g2432 596 TIGRFAM PME_inhib: pectinesterase inhibitor domain 71 231 IPR006501 GO:0004857
Aed2g2432 596 Pfam Pectinesterase 281 580 IPR000070 GO:0030599|GO:0042545
Aed2g2432 596 ProSitePatterns Pectinesterase signature 1. 306 325 IPR018040 -
Aed2g2432 596 CDD PMEI-like_3 82 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2432 Aed-Chr2 27311289 27315598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2432 29 594 Carbohydrate Esterase AT3G05610 49.296 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2432 K01051 - gmx:100801686 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2432 2 27311289 27315598 Aed8g1727 8 22294677 22297253 PCT