Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2430 ATGGCCATGCTTAGTCTCTTTTTCATTCTCATGCTTTTACCCTCACTTGAGTCTCTCTCAGATGAAATGTTTATTCCCTCAGAAGTCCAAACCCAAGACATGCAAGCCCTGATTGCACAAGCATGCATGGACATTGAAAACCAAAACTCATGCCTCACAAACATCCACAACGAGCTCACAAAAATAGGGCCTCCAAGCCCCACATCAGTGGTGAGTGCAGCACTGAAGCACACACTCAACGAAGCAAGAGTGGCCATCGACAACATGACAAAGATCACCACATTCTCCGTCAGTTACAGAGAGCAACAAGCCATAGAGGATTGCAAGGAGCTCTTGGATTTCTCGGTTTCCGAGCTGGCAGGGTCGTTGGGGGAGATGAGGAGAATCCGTGCCGGAGATGCCAATGTGCAACACGAGGGAAACCTTGACGCGTGGCTGAGTGCGGCACTGAGCAACCAAGACACGTGCCTTGAAGGGTTTGAAGGCACTGATCGACGCCTTGAGAGTTACATCAGTGGAAGCTTGACACAAGTGACGCAACTTATCAGCAATGTTCTGTCTTTGTACACTCAGTTGCATACATTACCCTTTAAGCCTCCGAGGAACACTAGTACTATTCCTCCTCCTGAAACCTTGGAGTTTCCTGAATGGATGACTGAGGCTGATCAAGAGTTGCTCAAAGCCAATAAGCCACATAATAATGGACATGGTGTGCGTGCAGACGCGGTTGTGGCTTTGGATGGGAGTGGTCACTATCGCTCTATAACCGATGCTGTTAATGCGGCTCCTAGTTACAGTCAAAGGAGGTACGTTATTTACGTGAAAAAGGGTCTTTACAAGGAGAATGTGGACATGAAGAGGAAGATGACCAACATCATGCTTGTTGGGGATGGTATTGGCCAAACCATTATCACTAGCAACCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCGACCCTAGCTGTATCCGGGAAGGGTTTCATTGCGAAGGACATGTCATTCCGGAACACGGCGGGACCAGTGAACCATCAAGCAGTGGCACTGCGTGTGGATTCAGACCAATCAGCCTTTTACAGGTGCAGCGTGGAAGGGCACCAAGACACGCTCTACGCCCACTCCCTACGACAGTTCTACCGCGAGTGCGAAATCTATGGCACCATAGACTTCATATTTGGCAACGGGGCCGCAGTCTTGCAGAATTGTAAAATATACACCAGGGTCCCACTTCCCTTGCAGAAGGTTACCATCACGGCCCAAGGAAGAAAAAGCCCACACCAGAGCACTGGCTTTACGATCCAGGATAGCTTTATTCTGGCCACCCAGCCCACCTATTTGGGCCGGCCCTGGAAGCAATACTCAAGGACGGTTTACATTAACACATACATGAGTGGGCTTGTCCAGCCCAGAGGGTGGCTTGAGTGGTTTGGAAACTTTGCCTTGAACACTTTGTGGTATGGTGAGTACAGAAACTATGGGCCCGGTGCAGGGCTCTCTGGTAGGGTCAGATGGCCCGGTTATCATGTAATTAAAGATGCTTCCACTGCTGGTTACTTCACAGTTCAACGCTTCATTAATGGAGCCTCGTGGTTGCCAAGGACAGGTGTCAAGTTTACAGCAGGCTTGACCAATTGA 1638 0.4939 MAMLSLFFILMLLPSLESLSDEMFIPSEVQTQDMQALIAQACMDIENQNSCLTNIHNELTKIGPPSPTSVVSAALKHTLNEARVAIDNMTKITTFSVSYREQQAIEDCKELLDFSVSELAGSLGEMRRIRAGDANVQHEGNLDAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHTLPFKPPRNTSTIPPPETLEFPEWMTEADQELLKANKPHNNGHGVRADAVVALDGSGHYRSITDAVNAAPSYSQRRYVIYVKKGLYKENVDMKRKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIAKDMSFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSFILATQPTYLGRPWKQYSRTVYINTYMSGLVQPRGWLEWFGNFALNTLWYGEYRNYGPGAGLSGRVRWPGYHVIKDASTAGYFTVQRFINGASWLPRTGVKFTAGLTN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2430 545 Pfam Pectinesterase 241 528 IPR000070 GO:0030599|GO:0042545
Aed2g2430 545 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 193 IPR035513 -
Aed2g2430 545 SUPERFAMILY Pectin lyase-like 238 542 IPR011050 -
Aed2g2430 545 PANTHER PECTINESTERASE 7 543 - -
Aed2g2430 545 Gene3D - 236 543 IPR012334 -
Aed2g2430 545 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 192 IPR035513 -
Aed2g2430 545 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 193 IPR006501 GO:0004857
Aed2g2430 545 CDD PMEI-like_3 50 194 - -
Aed2g2430 545 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 7 543 - -
Aed2g2430 545 Pfam Plant invertase/pectin methylesterase inhibitor 37 188 IPR006501 GO:0004857
Aed2g2430 545 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Aed2g2430 545 SMART PMEI_2 33 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2430 Aed-Chr2 27305971 27308208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2430 8 545 Carbohydrate Esterase AT3G05620 63.139 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2430 K01051 - gmx:100810565 1010.36