Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2424 ATGGGGCATTTTTCCTCAATGTTCAATGGGTTGGCGCGGTCTTTTTCATTGAAGAAAGGAAGAAAGAGTAGAAAATGTGATAAAGGGAGGGAAGCTGCTGAAGCAATGGCAAAGGAAGCTAAGAAGAATGACATGATGTTGTGTGGCTCTGGTATTGTTCATGTCGATGGTTCAAACAACTTTGCCTCCGTTTTCTCCAAAAGAGGCCAGAAAGGAGTTAACCAAGATTGCTGCATAGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGTGGGATATTTGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGGCACCATCTTTGCTATGCAACTGGCAGGAGACACTAGCCCAAACTTCAATTGATCCCGAGGAAGAGAAAAACAAACAATACAGATTCAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAGCTAGAGCAATACCGCAAGATAGACTCATTCTACAGCGGAACGACTGGCCTATCAATTGTTAGACAGGTGTGGGATGTGGTCTCTAATAAAGAAGCAGTGGAAATTGTATCTTCAACAGAAGATAAAGCTAAGGCAGCTAAACGTTTGGTGGAGTGTGCTGTGCATGCATGGAAACGCAAGAGACGGGGCATTGCCGTGGATGACATTTCAGCTATTTGTCTCTTCTTTCACAGTTCCATTTCATCACACCATGTTGCCACCTTAAAATAG 750 0.4347 MGHFSSMFNGLARSFSLKKGRKSRKCDKGREAAEAMAKEAKKNDMMLCGSGIVHVDGSNNFASVFSKRGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMAPSLLCNWQETLAQTSIDPEEEKNKQYRFNIWKHSYLKTCAAIDQELEQYRKIDSFYSGTTGLSIVRQVWDVVSNKEAVEIVSSTEDKAKAAKRLVECAVHAWKRKRRGIAVDDISAICLFFHSSISSHHVATLK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2424 249 SUPERFAMILY PP2C-like 64 237 IPR036457 -
Aed2g2424 249 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 182 - -
Aed2g2424 249 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 183 244 - -
Aed2g2424 249 Gene3D - 54 181 IPR036457 -
Aed2g2424 249 Gene3D - 182 245 IPR036457 -
Aed2g2424 249 PANTHER ALPHABET, ISOFORM E-RELATED 1 182 - -
Aed2g2424 249 PANTHER ALPHABET, ISOFORM E-RELATED 183 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2424 Aed-Chr2 27272238 27275291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2424 1 225 PP2C-type Phosphatase Gene Family AT5G27930 58.798 2.94e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2424 - - gmx:100808955 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2424 2 27272238 27275291 Aed8g1721 8 22257287 22261521 PCT