Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2419 ATGAGTAGGATTGAATTATCGAGGACGAAGCCAGCGCCGGTACCATTGGGGACTTTGATTGGCCGTGAGCTTCGAAATGGAAAAGTTGAAAAGCCTTTCGTGAAGTATGGACAAGCTGGATTGGCCAAGAAAGGAGAAGATTACTTTCTGATCAAGACAGATTGCCTCAGGGTTCCTGGGGATGCATCAACGGCTTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATATCAGCTGCTATTTTTGTGAAGGAAAACTTGCTATGTAATGTTTTGAGTGCAATACCTCAAGATATTAGCAGGGATGCTTGGCTTCAGGCTCTTCCTCGCGCTCTGGTTGTTGGTTTTCTGAAGACTGACATTGAGTTTCAGCATAAGGGGGAAACTTCTGGAACAACAGCCACATTTGTTGTGGTTGATGAATGGACTATCACTGTCGCATCTGTTGGGGATTCCCGCTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTCTTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAGCGTGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTTGGACCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGCGACACAGATGTGGGAGAATTTATCGTGCCAATACCACATGTTAAGCAAGTTAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCATCTGATATCGCTGCCAAGTCATGTCGGGGTCTACCTGCAGAGCTTGCTGCAAAACTAGTGGTTAAGGAAGCTCTAAGGTCAAGAGGCCTCAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACCTCCCTGTATTACCACCTATTCCAAGAAAGAAACATAATATGCTAACTTCGCTTCTATTTTTTGGAAAGAAATCTGAGAACAATGTGAACAAAGCTACCAATAAGCTTTCTGCAGTTGGTGTTGTGGAAGAGTTATTTGAAGAGGGTTCTGCAATGCTTACAGAAAGGCTAGGAAAGGATTTTCCGCTAAATAAGAATTCTGGTATTTTCCGCTGTGCGGTATGCCAAGTGGACCAACCTCCTGGTGATGGTTTATCGGTGAACTCTGGGCCTTTTTTCTCTACAGCATCTAATCCATGGGAAGGGCCTTTCCTCTGCAAAAACTGTCGGAAGAAGAAAGATGCCATGGAAGGAAAAAGGCCTAGCAGACCTACCGTTACAGCATAG 1290 0.4465 MSRIELSRTKPAPVPLGTLIGRELRNGKVEKPFVKYGQAGLAKKGEDYFLIKTDCLRVPGDASTAFSVFAIFDGHNGISAAIFVKENLLCNVLSAIPQDISRDAWLQALPRALVVGFLKTDIEFQHKGETSGTTATFVVVDEWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDIAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKHNMLTSLLFFGKKSENNVNKATNKLSAVGVVEELFEEGSAMLTERLGKDFPLNKNSGIFRCAVCQVDQPPGDGLSVNSGPFFSTASNPWEGPFLCKNCRKKKDAMEGKRPSRPTVTA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2419 429 CDD PP2Cc 43 297 IPR001932 -
Aed2g2419 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 428 - -
Aed2g2419 429 SMART PP2C_SIG_2 50 297 IPR001932 -
Aed2g2419 429 Gene3D - 33 301 IPR036457 -
Aed2g2419 429 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Aed2g2419 429 SMART PP2C_4 23 295 IPR001932 -
Aed2g2419 429 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 428 - -
Aed2g2419 429 Pfam Protein phosphatase 2C 63 278 IPR001932 -
Aed2g2419 429 SUPERFAMILY PP2C-like 38 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2419 Aed-Chr2 27234963 27239058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2419 1 428 PP2C-type Phosphatase Gene Family AT1G09160 76.869 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2419 - - gmx:100807886 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2419 2 27234963 27239058 Aed2g2419 2 27234963 27239058 ECH
Aed8g0692 8 6001562 6008200 Aed2g2419 2 27234963 27239058 ECH
Aed2g2419 2 27234963 27239058 Aed8g1711 8 22174610 22177872 PCT