Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2416 ATGTCGTATCGACCTTCCGCCAACTCCCGGACCGAGGTTCGTCGGAACCGCTACAAGGTCGCTGTAGATGCCGATGAAGGTCGCCGGCGCCGAGAGGATACGATGGTGGAGATTCGAAAGAATCGTAGGGAAGAGAGTTTGCAGAAGAAGAGACGCGAGGGTCTCCAATCGCAGCAGAATCCCGCGTCAGTTCACTCCACTGTAATAGAGAAGAAGTTGGAACACCTTCCAGCCATGGTTGCAGCTGTTTGGACTGATGACAATAACAGGCAGTTTGAGGCCACAACTCAGTTTCGGAAGTTGCTTTCGATTGAACGTAGCCCACCAATTGAGGAGGTTATTCAAGCTGGTATAGTTCCACGCTTTGTTGAGTTCTTGATGAGGGAAGATTTTCCACAGCTGCAGTTTGAGGCAGCTTGGGCTTTGACAAATATAGCTTCAGGAACATCTGAAAACACTAAGGTGGTAATTGATCATGGTGCTGTCCCAATTTTTGTAAAGCTCCTTGGTTCTCCCAGTGATGATGTCCGTGAACAGGCTGTTTGGGCATTAGGAAATGTTGCTGGAGATTCTCCTAGATGCCGTGATCTTGTTCTCGGTCATGGAGCTTTGCTTCCTCTTTTGGCACAATTGAATGAGCATGCCAAGCTTTCTATGCTAAGAAATGCTACCTGGACACTATCGAATTTCTGCAGGGGGAAACCGCAGCCTCCTTTTGATCAGGTTAAACCTGCACTTCCTGCTCTTGCCAGTCTTATCCATTCAAATGATGAAGAAGTCTTGACTGACGCTTGTTGGGCACTTTCATATCTTTCTGATGGTACAAATGACAAAATTCAAGGTGTAATTGATGCTGGTGTTTGTGTCCGGCTTGTTGAGCTTCTATTGCACCCTTCCCCTTCAGTGCTTATTCCTGCTCTTCGTACTGTTGGAAATATTGTTACTGGAGATGATGCGCAGACACAGGTCATCATCAACCATCAAGTTCTTCCTTGTCTTCTGAATCTCTTGACTAATAATTATAAAAAAAGCATAAAGAAGGAAGCATGCTGGACTGTATCAAACATCACCGCTGGGAACAAACAGCAGATTCAGGATGTAATTGAGGGTAATATAATTGCTCCTTTAGTCAGTTTGCTTCAAAATGCTGAGTTTGATATTAAGAAAGAAGCTGCTTGGGCAATCTCAAATGCCACTTCGGGTGGATCTCATGAACAAATCAAGTTCCTGGTAAGTCAAGGGTGTATTAAGCCCTTGTGCGATCTTCTCATCTGTCCTGATCCTAGGATTGTAACAGTTTGTTTGGAAGGGCTTGAAAACATCTTGAAGGTAGGAGAAGCTGAGAAAAATGTTAGCAGTACTGATGGTGTGAATCTATATGCTCAAATGATTGATGATTCTGAGGGGTTGGAGAAAATTGAGAACCTCCAGAGTCATGATAACACTGAGATTTATGAAAAGGCAGTGAAGATTCTTGAGACATACTGGCTGGAAGAAGATGATGATACTATGCCTCCAGGGGATGCTTCTCAATCAGGGTTCGACTTTGGTGGTGCTCAACCTCCTGCGGTGCCTTCTGGTGGATTCAACTTTAATTAG 1599 0.4472 MSYRPSANSRTEVRRNRYKVAVDADEGRRRREDTMVEIRKNRREESLQKKRREGLQSQQNPASVHSTVIEKKLEHLPAMVAAVWTDDNNRQFEATTQFRKLLSIERSPPIEEVIQAGIVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALASLIHSNDEEVLTDACWALSYLSDGTNDKIQGVIDAGVCVRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQVIINHQVLPCLLNLLTNNYKKSIKKEACWTVSNITAGNKQQIQDVIEGNIIAPLVSLLQNAEFDIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEAEKNVSSTDGVNLYAQMIDDSEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDDTMPPGDASQSGFDFGGAQPPAVPSGGFNFN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2416 532 PIRSF Importin_alpha 5 531 IPR024931 GO:0005737|GO:0006606|GO:0061608
Aed2g2416 532 MobiDBLite consensus disorder prediction 10 52 - -
Aed2g2416 532 PANTHER IMPORTIN ALPHA 2 522 - -
Aed2g2416 532 PANTHER IMPORTIN SUBUNIT ALPHA 2 522 - -
Aed2g2416 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 106 147 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 149 189 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 190 232 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 403 443 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 317 358 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 275 315 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 360 400 IPR000225 GO:0005515
Aed2g2416 532 SMART arm_5 234 273 IPR000225 GO:0005515
Aed2g2416 532 SUPERFAMILY ARM repeat 14 501 IPR016024 -
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 107 147 IPR000225 GO:0005515
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 404 441 IPR000225 GO:0005515
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 317 358 IPR000225 GO:0005515
Aed2g2416 532 Pfam Armadillo/beta-catenin-like repeat 278 314 IPR000225 GO:0005515
Aed2g2416 532 Gene3D - 13 52 IPR036975 GO:0006606
Aed2g2416 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Aed2g2416 532 Pfam Atypical Arm repeat 458 503 IPR032413 -
Aed2g2416 532 MobiDBLite consensus disorder prediction 1 64 - -
Aed2g2416 532 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Aed2g2416 532 Gene3D - 74 497 IPR011989 -
Aed2g2416 532 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Aed2g2416 532 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2416 Aed-Chr2 27205928 27216943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2416 K15042 - gmx:100806288 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2416 2 27205928 27216943 Aed2g2416 2 27205928 27216943 ECH
Aed6g2341 6 25257950 25262739 Aed2g2416 2 27205928 27216943 ECH