LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed2g2415	ATGGCATCAAAAAGAACATTTGACGAAAAGGATAATCAGAATAATGATGATAGAGATTTTCAAATTTGTGTTAAGAGGAGACATGTTAAAAGCCGTTTAAGCCTTAACCGGCAGAGTGGATCTGGTGGAGGCAGAGCTATGCAATTGTGCTTCGTGAATGGATTGCCTCAAGAAATTTTCACCCAAGCCCAGCTCACGGCTGAGAATGGTGATCCACTTCAAATTGAGCTGCGTAATGCTGCAACACAGCAACGCGTAGTCACAGGAGAAGTTTCCAGCATGAAGGTTGAGATCTGTGTGCTACATGGTGATTTTGATGAAGAGGAGTGGACTGCAGAGGAGTTTAATGCTCAAACTGTGAAACCAAGAGAGAGGAAGGGTCCATTACTCACAGAGACGGTCATTCAACTTGAAAAAGGGGTTGCTTCTATCAACAACAAGAAGAAGATGATGTTTACTGATAACTCTAGCTGGACAAGAAGCAAAAAGTTTTGCTTAGGAGTTCGACCTGTACAACCTAATTCCGACATTAAGGAAGGCAGGACTGAATCCTTTAGGATCCTGGATAAACGAGGAGAGAAAAACAAGAAACCCGAAAGGCCATCTTTGAATGATGAGGTATGGCGTCTGAGGGGCATAGGAGAAGGGAGTCCGCTTCACAAGGATCATGAAATCAAAACTGTCAAGGATCTTTTGCGCTTCGACACAACTGGTGCATTACGGGAGAAATTCGGCAATAAATATAAATGGGACAAAATTATTAAACATGCTAAAGGTTGTGAATTGGACTCTGATGAGCGCTACACCTATACGTATCATCCAACGGAACAACTAATACCCGTTACCCTTGTCTTAAACTGCATCTATGAGGTTGAGGAGGTGTTTTATGGCCAACGATCTCTTTTACTGCCATCTCTCAATTTAGAGGAGAAGCGTTTGGTGAAAAGAGTTACACAGGAAGCATACAAAAATTTGCACAATCTGAAGAAGTTGACACCATGCAATGAGGTCTCCCTACCTGTTCAGCAACAGCCAGGGGAAGGGGCAGGGCAATTTGAAATGTGGAACCAATTTGAAAATAATAATCCATGGTATTCTTACTCCTCCTTTCCCTGTGGTGATGGACCATCATCATCTATCGATCATTTCTTTTACAACAACACTGACACTGCTGAGTATATACCAATAAAAGGGAAAAGGAAAACAGTTTGGCAGCAGAAGTTTCCAAAGATTCGAAATGCTCTCAAATGGCTCATACCGCATATGGCTAAAAACAAGCCAAATTTCTTTTACCGTCAGCCGCCTGATCAGTATTGA	1317	0.4214	MASKRTFDEKDNQNNDDRDFQICVKRRHVKSRLSLNRQSGSGGGRAMQLCFVNGLPQEIFTQAQLTAENGDPLQIELRNAATQQRVVTGEVSSMKVEICVLHGDFDEEEWTAEEFNAQTVKPRERKGPLLTETVIQLEKGVASINNKKKMMFTDNSSWTRSKKFCLGVRPVQPNSDIKEGRTESFRILDKRGEKNKKPERPSLNDEVWRLRGIGEGSPLHKDHEIKTVKDLLRFDTTGALREKFGNKYKWDKIIKHAKGCELDSDERYTYTYHPTEQLIPVTLVLNCIYEVEEVFYGQRSLLLPSLNLEEKRLVKRVTQEAYKNLHNLKKLTPCNEVSLPVQQQPGEGAGQFEMWNQFENNNPWYSYSSFPCGDGPSSSIDHFFYNNTDTAEYIPIKGKRKTVWQQKFPKIRNALKWLIPHMAKNKPNFFYRQPPDQY	438

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed2g2415	438	Pfam	Calmodulin binding protein central domain	202	260	IPR046830	-
	Aed2g2415	438	Pfam	Calmodulin binding protein-like N-terminal domain	47	189	IPR046831	-
	Aed2g2415	438	PANTHER	OS02G0177800 PROTEIN	37	341	IPR012416	GO:0005516
	Aed2g2415	438	Pfam	Calmodulin binding protein C-terminal domain	270	329	IPR046829	-
	Aed2g2415	438	PANTHER	CALMODULIN-BINDING PROTEIN 60 G	37	341	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed2g2415	Aed-Chr2	27197412	27204955	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed2g2415	47	346	Calmodulin-binding Proteins	AT5G26920	37.580	1.46e-49	172

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed2g2415	-		-	gmx:100797598	383.259