Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2412 ATGGGTTTGGATTCGTTGCCAGCTGCGGCACTCACTGACCTCTCCTGCACTTCATTGTGTGGCTCTAAATCTCATGGAGCTTCCCATTGTAATGAGGGCGTTCTTCACTCAGTGGATGACTTTTGCCCTGCAGTCTACATAAACACACCGCTTAAGCTGGAGAAGTCTTCTTTGGATGCCATGGAGTCAAGGGCACGAAAACTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAAACTGTTGTCTCCTATCAAGAGTCCTGGTTTTCTGCCACCAAAAAATGCAGCTCATGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCGGCCATATTTGAGGAATAGAACAGCATCAACCGGGCCTTCCTCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTTGAAGCTGCACAATATGCATCCGTGCCTGGAAAGCCTGTGAATCTGAGCAATGTCTATCCTGAAAATGGAAAGCTTAGTGAGAGGAGTAGTAATGTGTATAAATGCACTTCAGCATTCAAGGGTTCAAGAGGTTCAGAAAAAAATAGTTATTGCCATTTAGCCAGTAAAGGAAAATCAGTTCCACTCACAATACAAGCCAAAAACAATTCTCATAGTAGAGATACATTGATTTCAAATGGTGATAGGAAATGCATGAAACAGAAAGAGAAGAATGTGATAAAGTCAAATCAACTCTCAAGGAGCCAGAAACCAAGTACACAAAAAGTCATGCAGCTGAGACCTTCCTCAAGCCGGAATAGCAATGTGCTTGGGCAGAATAATCAAAAGCAAAATAGCATGACTGCCAAGGGTAAATCAACTTCAAAAATAGATTCCAATAAGCCAACATCGCGGGCTTCATCTTCAGAGACTTCTGGAATAAGGAAGACTATGAACAAGGGTGCTATAACTGCCAATACTCAACCCAAAAGGTCAAGCACTAGGGAAACTGACAACCAAAAGCAGTTTCCAAGGTCCAAAACAGTGAGTATTTCCCAGAAGAAAATTAGCAGAGATGTTCATGAGGCAAGAGATCATGATAATGCAGTAAATATTTTTGGAAGTAAGTCCATTAAATGCAATTTTACGACCGATGGAAGGCAACCTATGATAGATAGTGAAGCTTTAAGTTTCCTGTTGGACAAAAAGCTGCAAGAATTGACATCTAGAATTAACTTACCTCAATGTACCTTGGCCACAGAAGGGTCTTCTACTGGTTTGAGATCTAGTGTGCAAGATAAAGTTCCCAGTGTGTCAAGCAACATGCCTAAGGAACAAGACAATAGCTTTTGCAGTGACCTGTCTAGTGATAAACTGGATAGCATGCTTAACTCTCATTGTTGTTCAAGTGATGATCCAGTGCTTAGCATGAATCAGCAATTGCAGACATCAGAAGTAAGTGAAGATCCTAGCTGTAGCAGCAACAGTGAAAGTGGTAATGGTCTAGTTTATTGGCATTCCACTGCTGTTACAGGTTTTGAAACTCCTTTTGTCAGCGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAATTTATTCTTCCACACAAGATGAAGAAGTATCTAGTTTTTCCCAGATAAGCGAATCTGTATCAGTTGAAAGTGAGGTGAAAGGGTCAGAGCAAAGCTCTTCCACATTGGGGGGCGAAAATATGACCATCCAACAAATAAGTGGAGTATCAAATTCGGTTGGTTTTAAAAGATCAAGGAACACGGTACTTGAATATGTACAGGATATTCTTTGCAATGCAGAGTTTGTGGCAGAAGAATTTGTCATTGGTCAAACTAGTACACTCATAATGCCAAATATCTTTGATCTGTTGGAGAATCAGAATTATGGAACAGAAAACTATGGAGAAGAGTACTGTAAGCTTGAAAGGAAGGCAATATTTGACTGTGTGAGCGAGTTCCTAGAGTTGAGATGTAAGCAAGCATTCGTTGGAACGTGCAAAGCGTTGCCCGTATGGATGATGTCAGTTCAGGAGCAGAGCTGGATAGCAGAGGAACTGCACAAGGAGTTGCTGGGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTGATCAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGAGACATACTATCTTATTTGATTGATGAATTGGTGTCAGATTTGTTACATGTCTAA 2265 0.4119 MGLDSLPAAALTDLSCTSLCGSKSHGASHCNEGVLHSVDDFCPAVYINTPLKLEKSSLDAMESRARKLENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGFLPPKNAAHVMEAAAKIIEASPRPYLRNRTASTGPSSVPLRILNLKERFEAAQYASVPGKPVNLSNVYPENGKLSERSSNVYKCTSAFKGSRGSEKNSYCHLASKGKSVPLTIQAKNNSHSRDTLISNGDRKCMKQKEKNVIKSNQLSRSQKPSTQKVMQLRPSSSRNSNVLGQNNQKQNSMTAKGKSTSKIDSNKPTSRASSSETSGIRKTMNKGAITANTQPKRSSTRETDNQKQFPRSKTVSISQKKISRDVHEARDHDNAVNIFGSKSIKCNFTTDGRQPMIDSEALSFLLDKKLQELTSRINLPQCTLATEGSSTGLRSSVQDKVPSVSSNMPKEQDNSFCSDLSSDKLDSMLNSHCCSSDDPVLSMNQQLQTSEVSEDPSCSSNSESGNGLVYWHSTAVTGFETPFVSESYLDSEDSAYGSTIYSSTQDEEVSSFSQISESVSVESEVKGSEQSSSTLGGENMTIQQISGVSNSVGFKRSRNTVLEYVQDILCNAEFVAEEFVIGQTSTLIMPNIFDLLENQNYGTENYGEEYCKLERKAIFDCVSEFLELRCKQAFVGTCKALPVWMMSVQEQSWIAEELHKELLGFRSMEEVMVDELVIKDMSSGCGKWLDFDVEAFEEGLEVEGDILSYLIDELVSDLLHV 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2412 754 MobiDBLite consensus disorder prediction 421 450 - -
Aed2g2412 754 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 385 - -
Aed2g2412 754 MobiDBLite consensus disorder prediction 244 332 - -
Aed2g2412 754 Pfam Domain of unknown function (DUF4378) 595 746 IPR025486 -
Aed2g2412 754 Coils Coil 51 71 - -
Aed2g2412 754 PANTHER DUF4378 DOMAIN PROTEIN 1 385 - -
Aed2g2412 754 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 387 754 - -
Aed2g2412 754 PANTHER DUF4378 DOMAIN PROTEIN 387 754 - -
Aed2g2412 754 MobiDBLite consensus disorder prediction 222 361 - -
Aed2g2412 754 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2412 Aed-Chr2 27175513 27180211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2412 46 752 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.091 1.65e-70 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2412 - - gmx:100804688 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2412 2 27175513 27180211 Aed8g1705 8 22144963 22149823 PCT