Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2404 ATGGACTCAAGCGTCCACTCTGTTACGCTGTTGCAACAATCCAATCACAAGAAGCGCCGCAAAATCACGGACCACACTTCTCTTCTTCCTTGCTGGACTTCCCAAACCGAGCAGCGCCTCTACTCCTCCAAGCTCCTCCACGCCCTCCGCCGTAACAACCCTATCTCCGCCCGCGATGTCCAAGCCTCCGCCGACCGCGTCCTCGCTGCCACCTCCAAAGGCCGAACTCGCTGGAGCCGCGCTATTCTCGCGAATCCGTTGGGCCGGTGGAAGCAGAAGCAGAGCTGGCAGCACAAGAAGATCAAGAAGTACTCCGCAGCCAACAGATTGATGAAGAAGAAGAGGACGCCGGAGTTTCGGAAAAAGGTGCCGCCTGTGCAGAAGAAAGCTCGCGTTCTTGGACGGATAATCCCCGGTTGCCGGAAGGTGTCGCTTCCGAAGCTTCTAGAAGAAACCGGCGACTATATTTCAGCGTTGGAGATGCAAGTGCGAGCCATGAAGGCTCTCGCCGACCTTCTCGCCGCCAGTGCGCCGCCGCCAGCTCCGATCGGTTTGAGTTGA 561 0.5793 MDSSVHSVTLLQQSNHKKRRKITDHTSLLPCWTSQTEQRLYSSKLLHALRRNNPISARDVQASADRVLAATSKGRTRWSRAILANPLGRWKQKQSWQHKKIKKYSAANRLMKKKRTPEFRKKVPPVQKKARVLGRIIPGCRKVSLPKLLEETGDYISALEMQVRAMKALADLLAASAPPPAPIGLS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2404 186 MobiDBLite consensus disorder prediction 1 22 - -
Aed2g2404 186 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 185 IPR044660 GO:0006355
Aed2g2404 186 PANTHER TRANSCRIPTION FACTOR BHLH150 10 185 - -
Aed2g2404 186 CDD bHLH_AtIBH1_like 120 164 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2404 Aed-Chr2 27137753 27138313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2404 32 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.000 5.14e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2404 - - gmx:100813766 208.764