Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2397 ATGGGTGAACCAGGGTCATTTGCATCCTCCGAAGTTGCTATCGGATCCGGATCTTCTCCACCTTCGAAGAAGGCTCGGGGTAGGCCCTTAGGTTCCAAGAACAAGCTAAAACTACCCTTCATGGTTAACCAAGATAATGAGCCTGACCTAAAACCCATTTTCATTCAAGTCCCTAAAAACTCTGATGTGATTGAGGCTGTGACCCAATTTGCTCGTCGCTGCCAAGTTAGCATCACAGTGCAAAGTGCATCTGGGTCAATTTTAAAAGCCACTCTTTTCGAGACTAATTCTCGCGCTTCTCCTTTCATTGTTCATGGATCCTACACTTTGATTTCATTCACAGGCACCTACATCAACAACAACCCTTTTGTTGTTGATTCTTCCTCCTCCTCATCCAATCTTGACCTTCAGTGTTCTTTTATGATTTCTTTTGGTTCGATTTTAGGTCAAAGCTTTACTGGGACTGTTGCAGGGAAGGTTATTGCAGGTGATGATGTTACCGTGGTAGTTACTATTCTCAAGGCACTTTGA 531 0.4369 MGEPGSFASSEVAIGSGSSPPSKKARGRPLGSKNKLKLPFMVNQDNEPDLKPIFIQVPKNSDVIEAVTQFARRCQVSITVQSASGSILKATLFETNSRASPFIVHGSYTLISFTGTYINNNPFVVDSSSSSSNLDLQCSFMISFGSILGQSFTGTVAGKVIAGDDVTVVVTILKAL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2397 176 Gene3D - 50 176 - -
Aed2g2397 176 ProSiteProfiles PPC domain profile profile. 47 176 IPR005175 -
Aed2g2397 176 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 174 - -
Aed2g2397 176 SUPERFAMILY AF0104/ALDC/Ptd012-like 50 173 - -
Aed2g2397 176 Pfam Plants and Prokaryotes Conserved (PCC) domain 51 173 IPR005175 -
Aed2g2397 176 MobiDBLite consensus disorder prediction 1 32 - -
Aed2g2397 176 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 174 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2397 Aed-Chr2 27072549 27073079 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2397 23 170 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.333 2.62e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2397 - - gmx:100527104 193.356