Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2395 ATGGATTATTCAGGTACCGTAACTCCTCTATCCACCCCCTTCGAAGATAACACGATTCAGGTTGATGTAGATTCTCAGAAACGTGGTAGGCGTTTAGGCTCCAAGAAAGAGCTTTCCCAAAAACCCATTTTCATTCAAGTCCCTAAAAACTGTGATGTGATTGAGGCAGTGGTCCAATTTGCTCGTCGGTACCAAGTTAGCATTGAAGTGAGTAGTGCATCCGGGTCCATCTCAAAAGTCATTCTTTGCGAGCCTGATTCTCACACTTGTATTTTCATTGTTCATGGACCCTTCACTTTGATTTCCCTCACTGGCACCTACATTAACAACAACTCTGTTGCTGATGCTTCTTCATTTTTATCATTATCATCATCTAATGTTTCTTTTAGTACTTCTTTTTGTTTAAATTTAGGTCTATGTTATGCTGGGGTTGTTGGAGGAGAGATTATTGCATATGATGATATTACTGTGGTGGCTACTATTCTCAAACAACTATGA 498 0.3976 MDYSGTVTPLSTPFEDNTIQVDVDSQKRGRRLGSKKELSQKPIFIQVPKNCDVIEAVVQFARRYQVSIEVSSASGSISKVILCEPDSHTCIFIVHGPFTLISLTGTYINNNSVADASSFLSLSSSNVSFSTSFCLNLGLCYAGVVGGEIIAYDDITVVATILKQL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2395 165 Pfam Plants and Prokaryotes Conserved (PCC) domain 41 162 IPR005175 -
Aed2g2395 165 Gene3D - 41 165 - -
Aed2g2395 165 ProSiteProfiles PPC domain profile profile. 37 165 IPR005175 -
Aed2g2395 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 34 164 - -
Aed2g2395 165 SUPERFAMILY AF0104/ALDC/Ptd012-like 41 162 - -
Aed2g2395 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 164 IPR014476 GO:0003680
Aed2g2395 165 CDD DUF296 41 112 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2395 Aed-Chr2 27064259 27064756 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2395 4 159 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 30.409 5.90e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2395 - - gmx:100795303 141.354