Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2388 ATGGCCATGGGTGCTGGTCTCGTTGCGTTCCTCTTAATGGTTCTTGTGCAATTTGTCTATGCTGTGATGAATATCACTTCAAAGCTTGCAATAGAATCTGGCATGAGCCCTCTTGTCCTTGTTGCTTATCGTCAACTCTTTGCAACTGTGTCCATTGCTCCCTTTGCTTATTGGCTCGAATGGAAGACACTTCCCAGGATCACAAAGCGTCTTATGGTTCAGATACTAATTTCGTCCTTGACAGGAATTACAGGAAATCAGATACTTTATTTTGTGGGGTTAAAATATTCAACCGCTACAATTGCATGTGCACTGACCAATTTGCTCCCAGCTTTCACTTTTATCCTTGCAGTTATATTCAGACAAGAGAATTTGGGAATAAAGAAGAGGGCTGGGCTAGCAAAGGTATTCGGGACAACATTGTGTGTGAGTGGAGCCTTGCTTTTGTCATTTTACCATGGAAAAACCATTGGTTTAGGCCAATCAAGTATTCACTGGAGATATGCAGAGAAAATGGAAGGAAGTAGCTCTTCAGCTGCCACAGGAAACATGTTTATAGGCCCTATAGTCGTTATTCTTAGCACCCTTGTTTGGGCACTATGGTTCATTGTTCAAAAAGACATAAGCAAGAATTTTCCAGCTCCTTACACAAGCACTGGCATAATGTGTTTGATGGCAAGCTTTCAATGCATGTTCATTGCCCTGTGTGTCGACCACACGGCCGCAGCTTGGTCACTCCACAATCCTATGAGACTTTCCTCTGCTCTTTATGCGGGAATATTTTGCACTGGATTAGCGTATTGCATCATGTCGTGGACCATTGAGAGAAAAGGTCCTCTTTATGTCTCTGTATTTACCCCTTTACAGCTTGTCCTCACTGCCATTTTAAGCTGGGCTTTGCTTCGGGAGAAGTTATACGTTGGAACTGCCGTAGGGGCTCTCTTGATAGTTTTGGGACTCTACTCTGTTCTTTGGGGAAAGAGTGAAGAGGTGAACAAGGAAGACGGTATTGAAGATGCAGTCAAGGATCCGAAGATTGACATGGAATTGCAATCATATGTGGCATCCAATAGTAACAATCGTCGTGTTAATGCATGA 1098 0.4317 MAMGAGLVAFLLMVLVQFVYAVMNITSKLAIESGMSPLVLVAYRQLFATVSIAPFAYWLEWKTLPRITKRLMVQILISSLTGITGNQILYFVGLKYSTATIACALTNLLPAFTFILAVIFRQENLGIKKRAGLAKVFGTTLCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGSSSSAATGNMFIGPIVVILSTLVWALWFIVQKDISKNFPAPYTSTGIMCLMASFQCMFIALCVDHTAAAWSLHNPMRLSSALYAGIFCTGLAYCIMSWTIERKGPLYVSVFTPLQLVLTAILSWALLREKLYVGTAVGALLIVLGLYSVLWGKSEEVNKEDGIEDAVKDPKIDMELQSYVASNSNNRRVNA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2388 365 PANTHER WAT1-RELATED PROTEIN 6 340 IPR030184 GO:0016021|GO:0022857
Aed2g2388 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Aed2g2388 365 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Aed2g2388 365 Pfam EamA-like transporter family 10 149 IPR000620 GO:0016020|GO:0016021
Aed2g2388 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 328 - -
Aed2g2388 365 PANTHER WAT1-RELATED PROTEIN 6 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2388 Aed-Chr2 27028026 27031164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2388 5 328 Nodulin-like Gene Family AT1G09380 60.494 1.45e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2388 - - gmx:100811613 649.818