Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2382 ATGGGTTCAGTTGGTGTGGCGCCAACATCATCAGGCTTGAGAGAATCCAGTGGTGTTGATAGATTGCCAGAGGAGATGAATGATATGAAAATCAGGGATGATAAAGAAATGGAGGCCACTGTTGTTGTCGACGGTAACGGAACGGAGACTGGACATATCATTGTTACTACCATTGGGGGTAGAAATGGTCAACCGAAGCAGACTATAAGCTATATGGCAGAGCGGATTGTTGGGCATGGATCATTTGGGGTTGTCTTCCAGGCTAAATGCTTGGAGACTGGTGAAACTGTGGCTATCAAAAAAGTTCTTCAAGACAAGAGTTGGTTCACCTTTGGATTCCAGTTGCTTAAAATCTTTAGGGCACTATCTTATATTCATCGTTGCATTGGAGTCTGCCATCGTGATATCAAGCCTCAAAATATATTAGTTAATCCACATACTCACCAGCTTAAATTATGCGACTTTGGAAGTGCAAAAGTCTTGGTAAAAGGCGAACCAAATATATCGTACATATGTTCTAGATATTATAGAGCACCTGAGCTTATATTTGGAGCAACTGAGTATACTACAGCTATTGACGTTTGGTCAGTTGGTTGTGTATTGGCTGAGCTTATGCTTGGACAGCCTTTGTTCCCCGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGGTTCTGGGAACTCCAACAAGGGAAGAGATCAAGTGCATGAATCCTAACTATACGGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGATTTTTCACAAGCGCATGCCTCCAGAAGCCGTTGATTTGGTATCAAGACTACTACAATACTCCCCTAACTTGCGGTGCTCAGCTTTAGATGCCTTGACCCATCCTTTCTTTGATGAACTTCGTGATCCAAACACTCGCTTGCCAAATGGTCGTTTCTTTCCACCATTGTTCAATTTTAAATCTCACGAATTGAAGGGAGTCCCAGTTGAGATTTTGGTGAAATTGATTCCAGAACATGCGAGGAAGCAGTGCCCGTTTCTTGGCTTGTGA 1041 0.4275 MGSVGVAPTSSGLRESSGVDRLPEEMNDMKIRDDKEMEATVVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERIVGHGSFGVVFQAKCLETGETVAIKKVLQDKSWFTFGFQLLKIFRALSYIHRCIGVCHRDIKPQNILVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELMLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCSALDALTHPFFDELRDPNTRLPNGRFFPPLFNFKSHELKGVPVEILVKLIPEHARKQCPFLGL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2382 346 CDD STKc_GSK3 66 297 IPR039192 -
Aed2g2382 346 SMART serkin_6 71 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2382 346 SUPERFAMILY Protein kinase-like (PK-like) 70 320 IPR011009 -
Aed2g2382 346 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 110 - -
Aed2g2382 346 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 116 344 - -
Aed2g2382 346 Gene3D Transferase(Phosphotransferase) domain 1 109 338 - -
Aed2g2382 346 ProSitePatterns Protein kinases ATP-binding region signature. 77 101 IPR017441 GO:0005524
Aed2g2382 346 MobiDBLite consensus disorder prediction 1 26 - -
Aed2g2382 346 MobiDBLite consensus disorder prediction 1 16 - -
Aed2g2382 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Aed2g2382 346 Pfam Protein kinase domain 115 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2382 346 ProSiteProfiles Protein kinase domain profile. 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2382 346 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 1 110 - -
Aed2g2382 346 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 116 344 - -
Aed2g2382 346 Gene3D Phosphorylase Kinase; domain 1 64 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2382 Aed-Chr2 26985016 26990123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2382 115 299 MAP Kinase Gene Family AT3G59790 40.107 1.63e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aed2g2382 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2382 K00924 - cpap:110817622 578.17