Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2377 ATGAGTGCTGGTGTCAGGGCTTTACGAGAAATGGGGACTAATCTTAATGCTGAATTATCCAAGAAAACTCCCATTTTTGGTCTCAAAGTTTGGGAAATAATTGGAATTCTAGTTGGATTGTCTATAATAGTAATTCTTTCTGTGGTCTCACTTTGCCTCACGTCAAGGAAGAAGTCTAGAAAAAATAAAGACAAGAGGATTCCCCTTAGTCAAATACCAACTGTCTCAAAGGAAATCAAGGAAGTGCGGGTAGAACAAGTGTCAACTAATGTATTTGCTCCTCGTGATGGAATACTTCTTACAATTCAGGATAAGTCCAGTGACAAGGAATCAGACAAAGTCATGGTTCATTTAGGTGTGGGGAAGATGAAGAATGGAGATAGAGATAGAGATAGCAGCACTCACTCGAATTCATTTCGTTACAAAGAGAAAGATGGAGGTGGATCACAGTCACAGTCAGGAGAAGAAGGTAGCTCTGGCACGGTTTCAGTGTACAAGCAATCTTCTTCTTCATACACTATAACAGCTCCTTCACCTCTATCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGTTACAAACCATTTTTCCAAAGAAAATGTCATTGGTGAAGGCGGGTATGGAGTGGTTTATAAGGGACAGTTGGTCAATGGAACTCCGGTGGCAGTTAAAAAGATACTCAATAACATAGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTTCGACACAAAAACTTGGTTCGCCTTTTGGGGTTCTGCATTGAGGGAACTCACAGGATGTTAGTTTATGAGTATGTCAACAACGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCACCATGGATACCTTACCTGGGAAGCACGCATCAAGATTCTCCTTGGCACAGCCAAAGCGCTAGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGTGATATCAAGTCAAGCAACATATTAATTGATGACGATTTCAATGCCAAGGTTTCTGATTTTGGCCTAGCCAAGTTATTGGGTGCTGGGAAGAGTTTTGTCACGACAAGAGTTATGGGAACTTTTGGATACGTGGCTCCTGAATACGCAAATACCGGCCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATTACTGGAAGGGATCCAGTTGACTATGGTCGACCAACAAATGAAGTGAACCTGGTTGATTGGCTGAAAATGATGGTTGGAAACAGGAGATCAGAAGAAGTGGTGGACCCCAACATTGAGGTGAAGCCATCCACCAGAGCTTTAAAACGGGCTCTCTTAACTGCTTTAAGATGTGTAGATCCAGATTCTGAGAAAAGGCCCAAGATGGGCCAAGTTGTACGAATGCTGGAGTCAGAGGAATACCCTTTACCCAGAGAGGACCGAAGACACCGAAGAAGAAATCGAGGGGGTAGTGGAGAAATTGAGTCCCAGAAGGAATATTCTGACACGGATAGGAGCGAGATTCAGGATTCAAGAGAAGAAAGAAGAGGGTGA 1581 0.4295 MSAGVRALREMGTNLNAELSKKTPIFGLKVWEIIGILVGLSIIVILSVVSLCLTSRKKSRKNKDKRIPLSQIPTVSKEIKEVRVEQVSTNVFAPRDGILLTIQDKSSDKESDKVMVHLGVGKMKNGDRDRDSSTHSNSFRYKEKDGGGSQSQSGEEGSSGTVSVYKQSSSSYTITAPSPLSGLPEFSHLGWGHWFTLRDLELVTNHFSKENVIGEGGYGVVYKGQLVNGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSFVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPTNEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLPREDRRHRRRNRGGSGEIESQKEYSDTDRSEIQDSREERRG 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2377 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Aed2g2377 526 Gene3D Transferase(Phosphotransferase) domain 1 283 493 - -
Aed2g2377 526 SUPERFAMILY Protein kinase-like (PK-like) 191 486 IPR011009 -
Aed2g2377 526 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 13 524 - -
Aed2g2377 526 ProSitePatterns Protein kinases ATP-binding region signature. 213 236 IPR017441 GO:0005524
Aed2g2377 526 Gene3D Phosphorylase Kinase; domain 1 188 282 - -
Aed2g2377 526 ProSiteProfiles Protein kinase domain profile. 207 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2377 526 SMART serkin_6 207 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2377 526 CDD STKc_IRAK 213 479 - -
Aed2g2377 526 Pfam Protein kinase domain 208 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2377 526 MobiDBLite consensus disorder prediction 143 162 - -
Aed2g2377 526 MobiDBLite consensus disorder prediction 119 142 - -
Aed2g2377 526 MobiDBLite consensus disorder prediction 478 526 - -
Aed2g2377 526 MobiDBLite consensus disorder prediction 119 162 - -
Aed2g2377 526 PANTHER OS01G0323000 PROTEIN 13 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2377 Aed-Chr2 26951597 26958096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2377 141 481 Trihelix Transcription Factor Family AT1G70460 46.821 4.64e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed2g2377 Pkinase 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2377 - - gmx:100787014 892.108