Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2374 ATGGGCGGAGATGGAGCGACGGCGAACGCGGAGGCGCAGTACGCGACGGCGAAGATATCGGTGTGGTGGGACATCGAGAACTGCCACGTGCCCAAGGGTTCCGATCCGCACGCGATCGCGCAGAACATCAGTTCCGTGCTTGTTAGCATGAACTACTGTGGCCCCGTCTCCATCTCCGCCTACGGGGATACTACGCGCATCACCGCATCTGTACAGCACGCTCTCTCCAGCACCGGAATCTCCCTCAACCACGTCCCCGCCGGCGTGAAAGATGCAAGTGACAAGAAGATTCTTGTTGATATGTTGTTCTGGGCAGTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCGGGTGACCGAGACTTCTCGAATGCTCTCCATCAACTTCGGTTGAGGAGATATAATATTCTTCTTGCGCAACCTCAGAAGGCATCTGCTCCCCTAGTTGCAGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACTTCCTCTTTCTAATGGTGAATCGCAACAACTTGGTAACGGTAGCCTTAGCCATGTATCATCTTCTGACTCCTTACAAATTCCGGTTACAAGTGCTGCTCAGATACAGCAACAGGTGGATTCCTACTCAGAAGTACATGTAGGAAATTCAAAATTTCCAAATGGAGGAAGGGGATTCGATTCTAGATATCAGGGGAAAACAAATTGGAGAAACCCAAGTCAATCAAATGGACCCAGAGCCATGAATCCACTGCCAGTTGGCCTTCAAGATAATCGTAATCGTAATAATACAAACTCTTATCGACCTGGCAACTTTAATTCAAATGTTCCGCTAAGTGGATCTGCTACAAATTATGTTCATGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAATTCCTTATTCACAGCCATTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATAATCCAAATTCCCATACTTTTCCAACTTCAATGGTGCCACCTAGGACTGGTGGTCCCAATTTCACTTCAGGGCAACATACCAATCTGCCAGATATTGGCAATCTGAACATTTCTGGTTATCCTAATAGTGTTCATAACATACCTACTGTTCCACAACGGAGTGGAGAGTTGAAACAGAATCCTAATAGTAGTGCTCCACATCTTTTAAGATCAATTGATGAAAAAAATGGGCATATGGTACATAATAGTGGCACACAACAATCACACCAAGGTTATCAACATGGTCCAGAATATCAATCTACGCCTTCAGCAGCAATGGGTAACAATAACCCTTCTGGTAATGGTATGTGGGGTTCTCCAGGATGTCCTAAACCTTCTGAATATGTACAAGGCCTAATAGGGGTTGTTCTACTTGCCTTGAACTCACTAAAAAATGCAAAGATGATGCCAACTGATGCAAATATAACAGATTGCATCCGATATGGAGATCCCAAGCGCCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGGTGGTGAAACAGAATTTAGGTGCTTTGCCGTTGTATGTTGGTAAGAATGATAAACTTTGGAAATGTGTAAATCCTTTAGGTGGTAGTCCTAAGCAGCACTCAAAAGAAACATGGGATGAAATTGAAAAGTTTTTAAGAACTCCTGCTGGAAGATCAGCACTAATGGCTACACAGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTTAAAGATCTTGCTTTGGGTGATGTCCTTCAGATATTGAACATGTTAATTACTCATAAAAAATGGATTGTGCATCATCCATCTGGTTGGCTACCACTTAACATTACTCTTCCTGAGACAAACCCCAGTTCAGGGGTTGTAGATGGTGCATAA 1899 0.4376 MGGDGATANAEAQYATAKISVWWDIENCHVPKGSDPHAIAQNISSVLVSMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGLPLSNGESQQLGNGSLSHVSSSDSLQIPVTSAAQIQQQVDSYSEVHVGNSKFPNGGRGFDSRYQGKTNWRNPSQSNGPRAMNPLPVGLQDNRNRNNTNSYRPGNFNSNVPLSGSATNYVHGNTDQLWSNNSNLQGNHQIPYSQPLRPNNFPLQPPFAPSNSYNPNSHTFPTSMVPPRTGGPNFTSGQHTNLPDIGNLNISGYPNSVHNIPTVPQRSGELKQNPNSSAPHLLRSIDEKNGHMVHNSGTQQSHQGYQHGPEYQSTPSAAMGNNNPSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTDANITDCIRYGDPKRRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGSPKQHSKETWDEIEKFLRTPAGRSALMATQCKYEAGIVIKNMCFKDLALGDVLQILNMLITHKKWIVHHPSGWLPLNITLPETNPSSGVVDGA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2374 632 CDD PIN_limkain_b1_N_like 18 142 - -
Aed2g2374 632 PANTHER LIMKAIN B LKAP 2 617 IPR024768 GO:0005777|GO:0010468|GO:1903231
Aed2g2374 632 MobiDBLite consensus disorder prediction 406 444 - -
Aed2g2374 632 Gene3D - 9 161 - -
Aed2g2374 632 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 617 - -
Aed2g2374 632 MobiDBLite consensus disorder prediction 371 397 - -
Aed2g2374 632 MobiDBLite consensus disorder prediction 230 246 - -
Aed2g2374 632 MobiDBLite consensus disorder prediction 254 312 - -
Aed2g2374 632 MobiDBLite consensus disorder prediction 212 319 - -
Aed2g2374 632 Pfam NYN domain 18 154 IPR021139 GO:0004540
Aed2g2374 632 Pfam OST-HTH Associated domain 569 623 IPR025677 -
Aed2g2374 632 MobiDBLite consensus disorder prediction 371 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2374 Aed-Chr2 26921440 26925883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2374 8 200 C2H2 Transcription Factor Family AT5G61190 68.912 1.42e-81 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2374 - - gmx:100794608 1224.92