Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2372 ATGACCTTAGCCATTGTTGATAATTTCTCTGAGAGGCCAGCTCCTAGCGGAGAAGCACGACAGCTAGATGGATATCCGATATGGTTCTCAGCAACTGAGAGAAAAATGATAGAGTCTGATCAAGGTGAACAATGGCCAATAAATGTGGTTGTGGCTAAAGATGGAAGTGGCCATTTCTCAACCATTGCTGAGTCACTCAATGCATGTCCAAAGAATAACACAATTGTTGCATGTACTATTTACGTGAAAAGAGTGGTAATGGGGAAAGGATTCATCTGCAAAGACATGGCTTTCATTGCCCCATCTGATATTGCAGGAGCACCAGCAGCCCTAGTCCTTTCAGATCATGCAGCATTCTTCAACTGCAAAATCGATGGCAATGAAGGAAGCTTGTTCGCAGTAGCTCAACGCCAATTCTACCGAGACTGTGAGATTCTCGGCAGTGTGGACATCATCAAGGGAGACTCAGCAACTGTGACTCAGAACTCACAAATCATAGTAAAACCTCGAAATTCCTCTGATTTGGTTTTAAGGAGAAACATTGTGAGTGCTAAAACCAGGTTAGACAAGTATCAGACAACAGGGTTAGTGATCCTAAACTGCACCATCACAGCACAGGAAGAAAGCATCAATACTCTTACTGCTACCACTTATTTGGGGTCCCCATGTACTGAATACTCAAGAACAATCATAATGGAATCATTTCTAGGAGATGTGATACACCCAAAAGGTTGGTGCAAATGGAGTGACAACTATGGCATTGAAACAGCAACATTCTGGGAATTTGATAATAGAGGGCCTGGGGCAAGAATTGACAAGAGGGTCAAGTGGAATGGATACAGTGCAATTTTTGAGAGAGACCAAATGGTTAGTTACACAGTTGGTCGGTTTGTTCAAGCCAACCAATGGTTGTTAAATAATCACATTCCATATGAATCTGGCTTTACTGTGTACAGAAATACTACTATGGTAGGCTGA 978 0.4233 MTLAIVDNFSERPAPSGEARQLDGYPIWFSATERKMIESDQGEQWPINVVVAKDGSGHFSTIAESLNACPKNNTIVACTIYVKRVVMGKGFICKDMAFIAPSDIAGAPAALVLSDHAAFFNCKIDGNEGSLFAVAQRQFYRDCEILGSVDIIKGDSATVTQNSQIIVKPRNSSDLVLRRNIVSAKTRLDKYQTTGLVILNCTITAQEESINTLTATTYLGSPCTEYSRTIIMESFLGDVIHPKGWCKWSDNYGIETATFWEFDNRGPGARIDKRVKWNGYSAIFERDQMVSYTVGRFVQANQWLLNNHIPYESGFTVYRNTTMVG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2372 325 PANTHER PECTINESTERASE 2 84 - -
Aed2g2372 325 SUPERFAMILY Pectin lyase-like 45 311 IPR011050 -
Aed2g2372 325 PANTHER PECTINESTERASE 85 316 - -
Aed2g2372 325 Pfam Pectinesterase 86 300 IPR000070 GO:0030599|GO:0042545
Aed2g2372 325 Gene3D - 78 317 IPR012334 -
Aed2g2372 325 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 85 316 - -
Aed2g2372 325 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 2 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2372 Aed-Chr2 26918114 26919609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2372 12 315 Carbohydrate Esterase AT4G02300 32.486 1.17e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2372 K01051 - gmx:102665007 522.316