Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2366 ATGGCCGACGAAAGCACAGCTAATTGCATCGATATTCTCCTTGCCATCATCCTCCCTCCCCTCGGTGTCTTCCTCAAGTATGGCTGCAAGGTTGAGTTCTGGATCTGTTTAATCCTCACCATTTTTGGCTACATTCCTGGAATTATCTATGCTGTCTATGCTATTACCAAGTGGACAATGAATAAAATATTTTCAAAGGACGACGGCTATGCATGTTCCTCATCAACTCCAATATTGATTGCTGTTTCTGTGTAA 255 0.4235 MADESTANCIDILLAIILPPLGVFLKYGCKVEFWICLILTIFGYIPGIIYAVYAITKWTMNKIFSKDDGYACSSSTPILIAVSV 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2366 84 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
Aed2g2366 84 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 57 IPR000612 GO:0016021
Aed2g2366 84 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Aed2g2366 84 PANTHER LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2366 Aed-Chr2 26889415 26891476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2366 5 57 RCI2 Gene Family AT3G05890 79.245 1.83e-26 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2366 - - gmx:100792684 108.997