Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2364 ATGCCTCTGCATGAGTTATACTGTGTGGCTAAAGGGAAACTTGATCCTATAGAGATGAACAACAACAACACATGTGCAGCTGATCAATCTTCTGTCAGACCAAATAATGATTTGTTTGAGCTGGTTTGGGAAAAGGGCCAGATTTCAGTGCAGGGTCAGTCCAGTAGAGCTAGAGTGAGCCCAAATTGCAAAACTTTGCCATCTCACACTCCCATAGGACATGTTAATAATGCTATTACTACCAATACAAGGATGGGTAAGTGTGGAAATTTAGGTGCTGAATTGAATGAAATTAGAAGGCTGGTTCCTTCAGGTGAATTGGATTTGAGTGAAGAAGAGGAAGACATGATGATGCCTTGGTTCAATTATGGAATGGATGAGTCTTTGCAACATGAATATAGTACTGATTTTTTCCATGAACCATCATCTGGGGTCACCATGAATGAGCTTTCAGCATCAAACAATTTTTCTTTGCTAGATAGAAGAAATAATTGTAGTAAGATATTTAGGGACACTCATAAACAACAACACTCTTCATTTGCATCTGTTAGATCCAGGGTAGCAGATATAGATGAAAATAATGCAAATAATGTTCCATCTAGCTTAAAGATGGAGGGGAGGCAAGGTCCTGTTATGTGTAGCAATAGTTCCACCATGATGAATTTTTCCCATTTTGCAAAACCAGCTGCTATTGTCAAAGCTAACCTTGAGAACATTGGCTTGGCATCAAGGTCAGGAAGTGTGGGAATAAAGATAAAAAGTGCTGCTAAATCAACAAAAGTTGATTTGAGTGGAGAGTGTCCAAAGAAACCAGCCACACACAATCAAGATCAGGATGGTGCTGTTTCTACAAAGTGTGACCCTTCTTGCAAACAAGTGTCCAAGATTGATCAAAATCAAACTTCAAATCTAGTTGTTGGTGAAAGTGGGAATAAAGGACATGAAGCCGTTGAAAAAGGAGTGGAGCCAGCTGTGGTTTCTTCCTCTGTTTGCTCCGGCAATGGGGCAGAGAGGGGTTCGGAGGATCCAAATCAAAATTTGAAGCGAAAAAGTATAGACACTGAGGACTTTGAGTGGCAAAGTGAAGATGTTGAGGAAGAATCAGTTGGTGTAAAAAAGGAAGTTCCTGCACGACGAATTGGAGCCAAGAGCAGCCGTTCAGCCGAAGTGCATAATCTATCTGAAAGGAGACGAAGAGACAGGATCAATGAGAAGATGCGTGCGTTACAAGAACTCATACCAAATTGCAATAAGGCGGATAAAGCTTCAATGTTGGATGAGGCGATCGAGTATCTTAAAACACTTCAACTCCAACTTCAAATAATGTCAATGGGAAGCGGTTTATATATGCCTGCGATGATGTTACCTCCGGGAATGCATGCACCACATTTTTCAGCTATAGGAGGTGTTGGCATGCAAATGAGGTTAGGAATGGGTTGTGGCAATGATGAGTCTTGTAGATTTATTCAAGTGCCCCAAATGCAAGGAATTACTCAACAAATTCCCATTACTCATAATACATCTGCTCCTCAACCTCACCACCCCATGCCAATGCCACATGCTCCCATCTTTTCTTTTCCAGGAGAACCTTTTATGAATCCCCCATCAACTTTAGGACCTGTGGATAAGGCTTCTTCAGCCTTTGGCTTAAAGGATCAGATTCCGCATGTGAACGCACAACTTGTACAAAACACCAACAACGGTTCTAATTCAACAAATCACATGTCAACACAGTGTGAAGCAACCGTTGGTGGATTTGAACACTTCGGCAGATGA 1776 0.4144 MPLHELYCVAKGKLDPIEMNNNNTCAADQSSVRPNNDLFELVWEKGQISVQGQSSRARVSPNCKTLPSHTPIGHVNNAITTNTRMGKCGNLGAELNEIRRLVPSGELDLSEEEEDMMMPWFNYGMDESLQHEYSTDFFHEPSSGVTMNELSASNNFSLLDRRNNCSKIFRDTHKQQHSSFASVRSRVADIDENNANNVPSSLKMEGRQGPVMCSNSSTMMNFSHFAKPAAIVKANLENIGLASRSGSVGIKIKSAAKSTKVDLSGECPKKPATHNQDQDGAVSTKCDPSCKQVSKIDQNQTSNLVVGESGNKGHEAVEKGVEPAVVSSSVCSGNGAERGSEDPNQNLKRKSIDTEDFEWQSEDVEEESVGVKKEVPARRIGAKSSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQLQIMSMGSGLYMPAMMLPPGMHAPHFSAIGGVGMQMRLGMGCGNDESCRFIQVPQMQGITQQIPITHNTSAPQPHHPMPMPHAPIFSFPGEPFMNPPSTLGPVDKASSAFGLKDQIPHVNAQLVQNTNNGSNSTNHMSTQCEATVGGFEHFGR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2364 591 MobiDBLite consensus disorder prediction 321 396 - -
Aed2g2364 591 CDD bHLH_AtPIF_like 386 448 - -
Aed2g2364 591 PANTHER TRANSCRIPTION FACTOR PIF3 1 577 - -
Aed2g2364 591 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 386 435 IPR011598 GO:0046983
Aed2g2364 591 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 384 447 IPR036638 GO:0046983
Aed2g2364 591 MobiDBLite consensus disorder prediction 327 341 - -
Aed2g2364 591 Pfam Helix-loop-helix DNA-binding domain 390 436 IPR011598 GO:0046983
Aed2g2364 591 Gene3D - 381 443 IPR036638 GO:0046983
Aed2g2364 591 SMART finulus 392 441 IPR011598 GO:0046983
Aed2g2364 591 MobiDBLite consensus disorder prediction 365 380 - -
Aed2g2364 591 PANTHER TRANSCRIPTION FACTOR PIF3 1 577 IPR044273 GO:0003700|GO:0006355
Aed2g2364 591 MobiDBLite consensus disorder prediction 267 287 - -
Aed2g2364 591 MobiDBLite consensus disorder prediction 342 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2364 Aed-Chr2 26878984 26882341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2364 1 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 38.618 7.61e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed2g2364 HLH 1.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2364 K12126 - gmx:102659557 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2364 2 26878984 26882341 Aed2g2364 2 26878984 26882341 ECH