Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2358 GGCTATGCCTATGGCGGTGGTAATGGCCGTTGTCGTCCCGCACCCTCACCTTTTGTAAATCACCGCAATCGCGTGCGTCTCTCACAGTCACAGAGAACATATATGAATTTTACTAGAGCTTTGACAACAACATTTAGGCATGCGACAAGATCAAATTTTGCATCCATCTTTACTGTGGAATCTGTTTGTGCATCACCAAGATGCGTGCTGGATTTCATCAACCAATCATCTCAGGGAGTGGCTGGTTTCGGAAGGGAGACTAAAGAATGTGGAATACGGTGCTTCCATGCTAGTTCGCAAGTCTGGGCAAGAAGTGATGGACCATTAGGTTTGCAGACCCCAAAGAGAGTATATGTGAAAAGGGGTGGTAGAAGCCAGCTACCTGTTGGAGCTCATAATGCCTGTCGTAATGTCCCAGCTATCAAATCTAATCCTGACAAAACAATAGAAATATTTGAAGGCATGACCCTTGTTGAACTGGCAAAGCGCACCGGAAGATCAGTATCTTCTTTGCAGGATATCCTCACTAATGTTGGTGAAAAGGTTGAATCAGAGTTTGAGCTTCTCAGCATGGATATAGCTGAACTTGTTGCAATGGAGGCTGGCGTCAATGTTAAGAGGCTACATTCAGCTGAAGGTGCAGAAATTTTACCACGTCCTGCAGTTGTAACAGTGATGGGTCATGTTGATCATGGTAAAACTTCTCTCCTTGATGCCTTGCGTCAAACATCAGTGGCAGCCAAGGAGGCTGGTGGCATCACTCAACATATAGGTGCTTTTGTGGTGGTCATGCCATCAGGAGCATCAATCACATTTCTTGATACTCCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCAGCAGTTACGGATATAGTGGTGCTGGTTGTTGCTGCGGATGATGGTGTGATGCCTCAAACACTTGAAGCCATGTCTCATGCTAAAGCAGCTAATGTACCAATTGTAGTTGCCATTAACAAATGTGATAAACCAGGTGCAAATCCTGAAAAAGTTAAAATGCAGCTTGCTTCGGAGGGCTTGCTTCTGGAGGAGATGGGTGGGGATGTTCAGGTTGTTGAGGTTTCAGCAACTGAAAAAATTGGACTGGATAGCCTAGAAGAAGCTTTAGTACTTCAGGCTGATATGATGGATCTTAAAGCACGAATTGATGGGCCTGCTCAAGCATATGTGGTTGAAGCAAGACTTGACAAAGGAAGGGGTCCATTGGTAACTACTATAGTGAAGGCAGGGACTCTAGTTTGTGGTCAGAATGTTGTTGTAGGCTCACAATGGGGAAGAATAAGGGCTATTAAAGGTATGGCAGGGAAGTTAACTCAACGAGCAACACCTGCTATGCCTGTTGAGATTGAAGGGCTTCGAGGGCTGCCAATGGCTGGTGATGATGTTATTGTTGTTCATTCCGAGGAGCGAGCTAGAATGCTTAGTTCTGGTAGGCAAAGGAAATATGAGGAGAACAGGCTTAAGAATAAGATGATACAGGACAAGCCAATTACTTCAGATGATTCCAAGGAGGTTCCACAGTGGGTTGAAATGCCAGTAATAGTAAAAGCAGATGTTCAGGGAACTGTTCAAGCTGTCACTGATGCATTGAAAACTTTAAATAGTGCTCAGGTTTTTGTAAATGTTGTCGATGTTGGTGTTGGGCCTATTTCACAATCTGATGTGGACTTAGCACAAGCTTGTGGTGCTTGCATAGTTGGATTCAATGTCAAAAGTCCGCCTACTGCCCTTAGTCAGGCAGCAACTCGTGCCAGTATCAAGATAATTCTGCACCGTGTAATTTACCACCTCTTGGAAGACATAGGCAATTTGATAATAGAGAAGGCCCCTGGGACTTCTGAAACCCAGGTTGCTGGGCAAGCAGAAGTGCTGAATATCTTTGAAATAAAAGGGAGCAAGTCCAAGGGACCTGATGTTAAGATAGCTGGTTGTCGTGTTGTTGATGGTTCTGTGATAAGGTCAGCAACCATGAGGCTTCTTAGGAGTGGGGAAGTAGTGTTTGAAGGACCTTGTACATCTCTTAAGCGGGAGAAGCAGGATGTGGATTCTGTGAAAAAGGGAAATGAGTGTGGAGTAGTAATCAACGATTGGTGTGATTTCCAAATTGGAGACGTTATTCAGTGCTTGGAACAGGTCATAAGGAAGCCCAAGTTTATTAAGTCAGAGAGTGGTGCTGTCAGAATTGAGTGCTGA 2220 0.4477 GYAYGGGNGRCRPAPSPFVNHRNRVRLSQSQRTYMNFTRALTTTFRHATRSNFASIFTVESVCASPRCVLDFINQSSQGVAGFGRETKECGIRCFHASSQVWARSDGPLGLQTPKRVYVKRGGRSQLPVGAHNACRNVPAIKSNPDKTIEIFEGMTLVELAKRTGRSVSSLQDILTNVGEKVESEFELLSMDIAELVAMEAGVNVKRLHSAEGAEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHIGAFVVVMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAINKCDKPGANPEKVKMQLASEGLLLEEMGGDVQVVEVSATEKIGLDSLEEALVLQADMMDLKARIDGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQNVVVGSQWGRIRAIKGMAGKLTQRATPAMPVEIEGLRGLPMAGDDVIVVHSEERARMLSSGRQRKYEENRLKNKMIQDKPITSDDSKEVPQWVEMPVIVKADVQGTVQAVTDALKTLNSAQVFVNVVDVGVGPISQSDVDLAQACGACIVGFNVKSPPTALSQAATRASIKIILHRVIYHLLEDIGNLIIEKAPGTSETQVAGQAEVLNIFEIKGSKSKGPDVKIAGCRVVDGSVIRSATMRLLRSGEVVFEGPCTSLKREKQDVDSVKKGNECGVVINDWCDFQIGDVIQCLEQVIRKPKFIKSESGAVRIEC 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2358 739 CDD mtIF2_IVc 628 717 - -
Aed2g2358 739 TIGRFAM small_GTP: small GTP-binding protein domain 221 374 IPR005225 GO:0005525
Aed2g2358 739 Hamap Translation initiation factor IF-2 [infB]. 24 725 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Aed2g2358 739 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 218 388 IPR000795 GO:0003924|GO:0005525
Aed2g2358 739 SUPERFAMILY Translation proteins 623 724 IPR009000 -
Aed2g2358 739 Pfam Elongation factor Tu GTP binding domain 223 380 IPR000795 GO:0003924|GO:0005525
Aed2g2358 739 SUPERFAMILY Translation proteins 392 474 IPR009000 -
Aed2g2358 739 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 388 IPR027417 -
Aed2g2358 739 CDD IF2_mtIF2_II 394 489 IPR044145 -
Aed2g2358 739 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 515 627 IPR036925 -
Aed2g2358 739 Gene3D - 516 620 IPR036925 -
Aed2g2358 739 Gene3D Translation factors 622 724 - -
Aed2g2358 739 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 137 730 IPR015760 -
Aed2g2358 739 Pfam Translation-initiation factor 2 513 610 IPR023115 -
Aed2g2358 739 Gene3D - 216 390 IPR027417 -
Aed2g2358 739 PANTHER TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL 137 730 - -
Aed2g2358 739 TIGRFAM IF-2: translation initiation factor IF-2 146 724 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Aed2g2358 739 CDD IF2_eIF5B 222 385 - -
Aed2g2358 739 Gene3D Translation factors 391 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2358 Aed-Chr2 26819291 26825020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2358 219 608 Eukaryotic Initiation Factors Gene Family AT1G21160 27.887 1.18e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2358 K02519 - gmx:100781314 1277.69