Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2346 ATGTCATCTTCATTATCAGCTCCATTGGTTCAGTGTCGGAACTCACTTCCACCCCTTCAGGGTAATTTTAGCCAAGATGTGTCTAAGGTTCAAAGGCCACGTGTGGTCTGTTGCGGTACCAAGTCACAGCTTGGGTACGGTAAAGCATTGGCATCAAGGTCACATAATGCCCTGAGGTTTTCTGTCACGCAACAATCTGAAGCAAGGTCAATTAGATATAGGAGAATGACATGTGTCAATGCTGCAGACAATGTTGTAGAGCTTCAAGACAAAGTGACAACCAAGTGTTTCTTTGATATAGAAGTTGGGGGTGAATCTGTGGGCAAGATCATGCTGAATAGTCTTTGTACAGGTGAGAAAGGATATGGTTACAAAGGAAGCTCCTTCCATCGTATAATCAAAGATTTCATGATTCAGGGAGGAGACTTTACAGAAGGAAATGGAACTGGTGGAATTAGCATCTACGGTCCTAGTTTTAAAGATGAGAATTTTATCTTGAAGCATACTGGTCCTGGAGTTCTGAGCATGGCGAATGCTGGTAAGGATACCAATGGCAGTCAATTTTTCATATGCACTGTAAAGACTCCATGGCTAGACAGTCGTCACGTTGTATTTGGACAAGTCATTGATGGAATGGATGTTGTGAGGACACTTGAATCCCAGGAGACGAGTAGGTTAGATGTCCCTCGGAAGCCCTGCAGAATTGTTAATTGTGGAGAACTGCCTATCGATGGTTGA 738 0.4336 MSSSLSAPLVQCRNSLPPLQGNFSQDVSKVQRPRVVCCGTKSQLGYGKALASRSHNALRFSVTQQSEARSIRYRRMTCVNAADNVVELQDKVTTKCFFDIEVGGESVGKIMLNSLCTGEKGYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGPSFKDENFILKHTGPGVLSMANAGKDTNGSQFFICTVKTPWLDSRHVVFGQVIDGMDVVRTLESQETSRLDVPRKPCRIVNCGELPIDG 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2346 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 141 IPR002130 GO:0000413|GO:0003755
Aed2g2346 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 200 215 IPR002130 GO:0000413|GO:0003755
Aed2g2346 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 187 IPR002130 GO:0000413|GO:0003755
Aed2g2346 245 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 199 IPR002130 GO:0000413|GO:0003755
Aed2g2346 245 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 118 239 IPR002130 GO:0000413|GO:0003755
Aed2g2346 245 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 51 244 - -
Aed2g2346 245 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 124 141 IPR020892 GO:0003755|GO:0006457
Aed2g2346 245 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 114 240 IPR002130 GO:0000413|GO:0003755
Aed2g2346 245 SUPERFAMILY Cyclophilin-like 91 241 IPR029000 -
Aed2g2346 245 Gene3D - 83 244 IPR029000 -
Aed2g2346 245 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 51 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2346 Aed-Chr2 26724018 26726901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2346 46 238 U-box Gene Family AT5G67530 36.598 1.44e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2346 K03768 - gmx:100785805 429.098