Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2344 ATGAGAATGAAGGTGATTCTAATAGCAGCATTCACCTTTGTTTCTGTGTTTATCAGCGCCAGATCTGAGGCTGAGCATTTCTTTCAAAACGATGGCGTTTCACTGGAAGCAACGCCCGGACCTCCACCTCTCATGGTCCCCCTCACTCTTATTCAGGGAGCTGCTTCCAAAGGAGCCGTCTGTTTGGATGGAACATTGCCTGGTTACCACTTTCATCCTGGATTTGGATCTGGGGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTTAGAAAAACTACCCGTCGTGGTTCCTCAAATTACATGGAAAAACAACTAGCATTCACGGGGCTATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAACGAGGCTGCACGGCTTCAATTCCGAGGGCAAAAAATATGGCAAGCTGCAATGGAGGAATTATTGTCCAATGGAATGCAGAAGGCCAACCAGGCGCTTTTGTCAGGATGCTCTGCGGGTGGTCTGGCATCTATTATTCATTGTGATGAGTTCCAGAGCTTGCTTCCTACATCTACCAAAGTGAAATGTTTGAGTGATGCTGGGTTTTTCCTAGATGCAGTTGATGTATCTGGGGGTCACACACTGAGGAATCTGTTTGGAGGTGTAGTTGACTTACAGGAGGTGCAAAAAAATCTGCCAAGAAGTTGTCTCAACCAACTGGACCCAATTTCATGCTTTTTTCCTCAGAATTTGATCAACCATGTTGAGACACCATTGTTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTTTGGTCCCACCTTCAGCAGATCCCCATGGCTCTTGGAAAGATTGTAAATCAAATCATGCACTCTGTAACTCATCTCAAATTCAGTTCTTCCAAGACTTCAGAGATCAAATGCTAAATGACGTGAAAGGCTTCTCAGGGACATCTCAGACTGGGTTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCGGAGAGACAAGATACATGGTTTGCTGATGACTCTCCGGTCATTAACAACATGCCAATTGCAGTTGCTGTTGGAGACTGGTTTTTCGACCGGAAAACTGTCAAAGCTATCGACTGTGCTTACCCCTGTGACAATAGCTGCCATAATCTGGTCTTCAAGATTCTACATATGATAAACTTTGATAATAGGCCTTATATTGATAATCTCATTGTAGAACTTAGTGCTGGTAAATCTGCTGTGGTGGACTACCAGTACCAGTCCACAAGTGATGGTGACACATCCACATCTACCAATACCACGACCACCATGATATATTCCCACTCCACGAAGCTGACTTTTACTACTGGCCTGTATATGCTAAGTGTTTTATTTATTGCCAATTACATGTTCCTAGTGCACTATAGACAGTTTTAG 1482 0.4345 MRMKVILIAAFTFVSVFISARSEAEHFFQNDGVSLEATPGPPPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSNYMEKQLAFTGLLSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNEAARLQFRGQKIWQAAMEELLSNGMQKANQALLSGCSAGGLASIIHCDEFQSLLPTSTKVKCLSDAGFFLDAVDVSGGHTLRNLFGGVVDLQEVQKNLPRSCLNQLDPISCFFPQNLINHVETPLFLLNAAYDAWQVQESLVPPSADPHGSWKDCKSNHALCNSSQIQFFQDFRDQMLNDVKGFSGTSQTGLFINSCFAHCQSERQDTWFADDSPVINNMPIAVAVGDWFFDRKTVKAIDCAYPCDNSCHNLVFKILHMINFDNRPYIDNLIVELSAGKSAVVDYQYQSTSDGDTSTSTNTTTTMIYSHSTKLTFTTGLYMLSVLFIANYMFLVHYRQF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2344 493 Pfam Pectinacetylesterase 44 389 IPR004963 GO:0016787
Aed2g2344 493 PANTHER NOTUM-RELATED 3 425 IPR004963 GO:0016787
Aed2g2344 493 PANTHER PECTIN ACETYLESTERASE 3 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2344 Aed-Chr2 26712791 26719752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2344 44 409 Carbohydrate Esterase AT2G46930 74.317 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2344 K19882 - gmx:100785270 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2344 2 26712791 26719752 Aed8g1596 8 21118250 21122939 ECH
Aed8g1596 8 21118250 21122939 Aed2g2344 2 26712791 26719752 ECH
Aed2g2362 2 26855901 26859531 Aed2g2344 2 26712791 26719752 ECH
Aed6g2214 6 24344109 24350008 Aed2g2344 2 26712791 26719752 ECH
Aed2g2344 2 26712791 26719752 Aed2g2344 2 26712791 26719752 ECH
Aed2g2344 2 26712791 26719752 Aed8g1575 8 20974057 20979291 PCT