Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2334 ATGGAGAACCGACACCACCGTGAATTGACCTTCCTTAGCCACCACCGTATGGATGATCACAAGCAGACCCATGTCGTCGCAGATCCTCCCATCAAGGAAATGGATTTTTTCTCCTCAGCTGATATTAAAGTTAAAAACAGTGGCAGTGATGTCGATGCTCATCATCCCCATGGATCTCCAACACGCGTCAATGATCACCATGTTAACACTGGATTGAATTTGACTTGTGCAACTGCTGCGGGAGTCACAAAATCAGAAAAGGGTGAAAATCCTGAAACTGAGCTGAGTTTTCTTGAAAGTCAGTTGCGGAGACTACAAGAAGAGAATAACAAGTTAAGAACTGTGCTGGACCAGATTACCAAAAGTTATACCCAACTACAAGCTCAACTCTTCATGGCTTTGCAAAAACAAAACTTTCCTCAGAATATGGAAGCAAATGGTGGGATGGTGTCAGGACAAAAAAGAGTGGACCCAGCAGGTGGAGCATGCAGCAGGAAGTTAGAGGTAGTGAATGAGGCATCGGTTTCAGATGAAAAGACAGATAAAGATGTATCGGTTTCTCGTTCAAACAACGTGGAGGTAATGTCAAAGACACATGATGACCCTCAATTGACTAAACTCAACCTTGGAAAGCATGCTGCTGCAGATGATGTTCTTGACCGGTCCTCCTCACAGAGCTGGGGCTCTTCCAAGTTTGAAGAACAACCCAAAACTGCACCAGAACCAGAACAACAACAACTTCCTTCAGATCAGATTCCCCTCAGAAAAGCCAGGGTCTCCGTACGTGCTAGATCAGAAGCTCCCATGATTAGCGATGGATGTCAGTGGAGGAAATATGGACAAAAAATGGCGAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGCACTATGGCCGTAGGATGCCCAGTTCGCAAACAGGTTCAAAGATGTGCAGATGACAAAACAGTGTTGACAACAAGCTACGAAGGTAATCACAACCACCCTCTGCCACCGGCCGCCACCGCCATGGCAAATACAACATCAGCAGCTGCAGCCATGCTGCTATCAGGTTCAGCGACAAGCAAGGAAGCAGCAGGATATTACACTTCTTCTTCAATCCCATATGCTTCAATGGCAACCCTATCAGCTTCAGCTCCATTCCCAACCATCACTCTCGATTTGACCCAAAACCCCAACGCTACGTTCCCTGTGCCGCTGCATGCAGTATCTAGTGGGCCCCACTTACTAGGGCACCCCTTGTTCTTCCCACAGAAGCTTCTTCCACCGCCACTTCAACATCAACGACAACCTTCGTCAATGGTGGAAACGGTGAGTGCAGCCATTGCTTCGGATCCAAACTTCACGGCGGCTTTGGCAGCAGCGATCTCATCAATCATTGGAGTACCAAGATCAGACGGATCACCGCAGCTTCCTCAATCATGCACTACTTTCTCCACCACCAACTAG 1449 0.4769 MENRHHRELTFLSHHRMDDHKQTHVVADPPIKEMDFFSSADIKVKNSGSDVDAHHPHGSPTRVNDHHVNTGLNLTCATAAGVTKSEKGENPETELSFLESQLRRLQEENNKLRTVLDQITKSYTQLQAQLFMALQKQNFPQNMEANGGMVSGQKRVDPAGGACSRKLEVVNEASVSDEKTDKDVSVSRSNNVEVMSKTHDDPQLTKLNLGKHAAADDVLDRSSSQSWGSSKFEEQPKTAPEPEQQQLPSDQIPLRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCADDKTVLTTSYEGNHNHPLPPAATAMANTTSAAAAMLLSGSATSKEAAGYYTSSSIPYASMATLSASAPFPTITLDLTQNPNATFPVPLHAVSSGPHLLGHPLFFPQKLLPPPLQHQRQPSSMVETVSAAIASDPNFTAALAAAISSIIGVPRSDGSPQLPQSCTTFSTTN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2334 482 MobiDBLite consensus disorder prediction 219 251 - -
Aed2g2334 482 Pfam WRKY DNA -binding domain 272 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2334 482 SUPERFAMILY WRKY DNA-binding domain 263 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2334 482 Coils Coil 95 129 - -
Aed2g2334 482 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 26 469 - -
Aed2g2334 482 Gene3D WRKY domain 255 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2334 482 ProSiteProfiles WRKY domain profile. 265 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2334 482 SMART WRKY_cls 270 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2334 482 MobiDBLite consensus disorder prediction 187 203 - -
Aed2g2334 482 MobiDBLite consensus disorder prediction 47 66 - -
Aed2g2334 482 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 469 IPR044810 GO:0003700
Aed2g2334 482 MobiDBLite consensus disorder prediction 171 252 - -
Aed2g2334 482 MobiDBLite consensus disorder prediction 47 62 - -
Aed2g2334 482 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2334 Aed-Chr2 26637928 26640905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2334 31 480 WRKY Transcription Factor Family AT4G01720 42.972 3.15e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g2334 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2334 - - gmx:100817839 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2334 2 26637928 26640905 Aed8g1566 8 20896258 20897608 PCT