Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2330 ATGTTTTCAACGGTTGAGACATTAATATCAAAGAGGGGATCTTTGGGAATCCAAGAAAATCTGAATATGCTTTCTTTGAGAATTAACGAGCCTTTATCTAAGTTCAATGGGTTCTCTAGAGATATGACAGAAAAGGACCGTATCAACAATGGGGACGTAGGCATTAGGATTCCACGCAAGATGAAAATACCTCCATATACATCTTGGGTGTACGTGGCAAGGAATGAGAAAATGGCTAAAGATCAAACAGTTCTTGGAAAATACCAAATGTATTATGATAAAAGTGGAGGTGAAATGATGATATGCAGCGATAGTGAAGAAGAGATAATAAATTCCAATGATGCTAATCATGATTTCACTGAGGCTGAAGACCAAATTCTACGGATGGCACTTAAGGAATATGGGTCTACTGAGGATGTATTGAGTATTGTTAAAGAGACGGTTAAGGCTACTGATTCACAAATCCTGGAGAGGTATGAAATACTCGAGGAAAATAATATGGAAGGTCTAGACCAGCATTCTGAAGATTGTCATTGTAGAGGATGTCAAAATCACGTCGGAATATGTTTAGAAGAAAGTTTAAGTTCTACTTTAGAACCTTTTGATGAACTATTTTGTCGTCGGTGCTTGATCTTTGACTGTCCTGTGCATGGCAATAATCAACCTTTAATATATCCTAGTGAAAAACAACCAATTTGGTCTAAACTTGAAGGTGACAGAAAACCATGCAGTGATCAATGTTACATTATGCTACAGAATGCCAATATTTTGTCAGAAATTACATCTCAAGGTTATTTTCAAGATAAAAGAATTACACCAATAGAAGAGGACCCGACATTGCCTCTTGATGAGCCTCAAAGTCTGAGAACCCCAAATGATATAGCCACTGGAATTGGCAATCATTATAGGGAACTCAGTTTGAATGGTGGTGGTGAAGAAAACCACACAACCTATGGTGCATTTTTTAAAAGTTTTAATGAACATGCTTCAAAGAAATTAACAGTTTCTGGTAGCTCTAGTCACGATCAGCAGGACAAAAGAGTTGTGGATGGAGAAAAAAATCTCACTGATGAGATAGAATTGAACCAATTGTCCATTTCAAGGGAAGTGCAAGCTGATGAGATGACAAGTGAGTTAGATTGGAAACCTTTAGAAAGAGATTTATATTTGAAGGGAGTAGAAATGTTTGGAAAAAACAGTTGCCTTATAGCCTTTAACTTACTTCTTGGCTTGAAGACTTGTTCAGAAGTGGCTAAGTACATGTTTACCAGGGAAGAGTCAATAACCCATGGATCCATATTAAGTTCAATCTTAGACAAAAATAACAAAATCAACCCAGAGTCTACGGTGAGAATTACAAGCATATTTTTCTTGTCTTTTTGTTTTCTTCTATTGTCTTTATCATTTTATTGGTTTAGAAATGTGGGGACCAAGAAATGCCATCAAGATCACGATCACAACGGAAAAAGGGCAAACCAAGGAAGTTCAATTATTCTCGAAAATCAGCAGGCCTTCCACCTAGATGGAGAAAAATTGCTTATGGACAAAATCAATGTAATAAGCAATATAGTCCTTGTGGCTGTCCGGGAATATGTGGAAAGGAATGTCCTTGTTTTACTCACGGAACGTGTTGTGAAAAATACTGTGGGTGTTCAAAACTTTGCAATAATCGATTTAGAGGATGCTACTGTGCTAAGAGTCAGTGCAGAAGTCGATTATGTCCATGTTTTGCGGCTAATCGTGAATGTGATCCGGATGTTTGTCGAAATTGTTGGATTAGGTAATATTCTTTTGGCAAAGTCGGATGTTATAGGATGGGGAGCCTTCACGAAGAACCCAGTTAACAAAAATGTTTGCTTGGGAGAGTATACAGGTGAACTAATCACCCCTAGAGAAGCAGAAAAGCGTGGAAAACTATATGATCGTATAAATACTTCATTTCTTTTTAATCTTAATGATCAGTGGGTTATTGATTCTTGTCGCCTGGGAGACAAGTTAAAATTTGCAAATCACTCATCAAAACCTAATTGCTATGCAAAGGTGATGCTTGTTGGAGGAGATCATCGAGTTGGCATATTTTCTAAGGAAAACATTGAAGCCGGTGGTGAGATTTTTTATGATTATTGGTACGATTTAGATTGTGCTCCACAATGGGCTCTACCACCTAACGAGACTTCTAAGAAAGATGAATCAGTTGTCTCTCACAACAGGGCAAAGAAAAACCAATCTCATTGTTGA 2238 0.374 MFSTVETLISKRGSLGIQENLNMLSLRINEPLSKFNGFSRDMTEKDRINNGDVGIRIPRKMKIPPYTSWVYVARNEKMAKDQTVLGKYQMYYDKSGGEMMICSDSEEEIINSNDANHDFTEAEDQILRMALKEYGSTEDVLSIVKETVKATDSQILERYEILEENNMEGLDQHSEDCHCRGCQNHVGICLEESLSSTLEPFDELFCRRCLIFDCPVHGNNQPLIYPSEKQPIWSKLEGDRKPCSDQCYIMLQNANILSEITSQGYFQDKRITPIEEDPTLPLDEPQSLRTPNDIATGIGNHYRELSLNGGGEENHTTYGAFFKSFNEHASKKLTVSGSSSHDQQDKRVVDGEKNLTDEIELNQLSISREVQADEMTSELDWKPLERDLYLKGVEMFGKNSCLIAFNLLLGLKTCSEVAKYMFTREESITHGSILSSILDKNNKINPESTVRITSIFFLSFCFLLLSLSFYWFRNVGTKKCHQDHDHNGKRANQGSSIILENQQAFHLDGEKLLMDKINVISNIVLVAVREYVERNVLVLLTERVVKNTVGVQNFAIIDLEDATVLRVSAEVDYVHVLRLIVNVIRMFVEIVGLGNILLAKSDVIGWGAFTKNPVNKNVCLGEYTGELITPREAEKRGKLYDRINTSFLFNLNDQWVIDSCRLGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFSKENIEAGGEIFYDYWYDLDCAPQWALPPNETSKKDESVVSHNRAKKNQSHC 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2330 745 Gene3D SET domain 594 710 IPR046341 -
Aed2g2330 745 MobiDBLite consensus disorder prediction 725 745 - -
Aed2g2330 745 CDD SET_EZH 596 710 - -
Aed2g2330 745 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 18 446 - -
Aed2g2330 745 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 595 742 - -
Aed2g2330 745 Pfam SET domain 605 708 IPR001214 GO:0005515
Aed2g2330 745 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 595 742 IPR045318 GO:0006338|GO:0018024
Aed2g2330 745 SMART set_7 594 715 IPR001214 GO:0005515
Aed2g2330 745 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 18 446 IPR045318 GO:0006338|GO:0018024
Aed2g2330 745 SUPERFAMILY SET domain 597 712 IPR046341 -
Aed2g2330 745 ProSiteProfiles SET domain profile. 594 709 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2330 Aed-Chr2 26605267 26610831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2330 578 708 C2H2 Transcription Factor Family AT2G23740 26.351 1.04e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed2g2330 SET 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2330 - K11430 gmx:106798111 640.573