Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2319 ATGTCAGGAAAGATAATTATCTCAGCTGTTTCTCTCATCCTCGTGGTGGGTGTGGCCATCGGTGTTGTGGTTGCCGTCAACAAGAAGGCCGGAGAGGATCCCACAATTCAATCTCATCAAAAATCTGTAGGGATTATATGCCAAAACACTGATGACCAGAAACTCTGCCATGACACTCTCAGCTCCGTGAAGGGCCTTGATACCGCAGACCCAAAGGCTTACATCGCCACGGCGGTGAAAGCCACCATGGACAGTGCTATCAAAGCCTTCAACATGAGCGACAAGCTCACAACCGAGTATGGAGGCAGCGATAGACGCACCAAGATGGCCTTGGATGATTGCAAGGACTTGTTGCAATCAGCGATACAGAGCCTTCAGCTCAGCATTGACATGGTTCACAACAACAACGTGCAAGCAGTGCATAACCAACAGGCTGATTTCAAGAATTGGCTCAGTGCTGTTATCTCGTACCAACAGGTTTGCATGGAAGGTTTTGACGATGGGAAAGAGGGTGAGAAGAAGATCAAGGACCAGTTGCAAACTCAAAACTTGGACCACGTTCAGAAACTCACTAGCATCACCCTTGACATTGTGAGTAATTTGTCCCACATCCTTGAGCAGTTTGGGTTGAAGCTTGACCTTAAACCCGCGTCTCGCCGTCTTCTCAGCAAGGATGGCTTACCCACTTGGTTCTCTCGTGCCGATCGTAAGCTCTTGGGTCGTGGATGGAGAGCAAATGTGGAGCCTAATGCTGTGGTTGCCAAAGATGGTTCTGGTCAGTTTAAAACTGTTGGCGAGGCTATTGCTTCCTATCCTAACAATCACCAAGGTAGATTCGTTATCTACGTTAAGGCTGGTATCTATGAGGAGTACATCACTGTCCCCCAGACTGCAAAGAACATTTTCATGTATGGTGATGGCCCTAAAAAGACCATCTTCACCGGTAGCAAGAACGCAAAGCTCGATAATTTCACTGTAGTTCAAAGTGCCACTTTCGCCAATGACGCTGACGGGTTCATTGGCCAGGCAATGACATTCCAGAACACAGCCGGTCCTAAGGGTGAGCAAGCTGTGGCATTCAGGAACCAAGGAGACATGTCAGCTCTGGTTGGTTGCCACATTTTGGGTTACCAAGACACCTTGTACGTTCAAACCAACAGGCAATTCTACCGTAAGTGCGTCATTTCCGGCACCATCGACTTCATCTTTGGCATTTCCAGCGCTTTGATCCAGAACTCCAACATCATCGTGAGGAAGCCCCGAGACGGTCAATTCAACGCAATCACCGCCGACGGCACATCCGAGAAGAACATGGCTACAGGAATTGTTCTTCAGGGTTGCAACATTGCCGCAGAAGACGAACTCTTGCATATCAAGTTCCAAGTGAAGTCATTCTTGGGCAGGCCATGGAAGAATTTCTCAAGGACAGTGGTCATGGAATCTAACATTGGTGACTTCGTTCACCCCGAAGGATGGGCCCCATGGGGAACGAAAAACTATGATGACACCTTGTACTATGCTGAGTACAACAACGATGGACTTGGTGCCAACGTTAACGGAAGGATCAAGTGGAAGGGTTATCATGCTTCCATTAGCCGCGAAGAAGCTACTCAGTTCACTGCTGCCCAATTCCTCAAGTCTGGACCAGTCAATGGAACAAACAATGGAACTGATTGGTTGAAGGGTATTCCTCACTACCTTGACTTCGCCAAACCTTGA 1719 0.4828 MSGKIIISAVSLILVVGVAIGVVVAVNKKAGEDPTIQSHQKSVGIICQNTDDQKLCHDTLSSVKGLDTADPKAYIATAVKATMDSAIKAFNMSDKLTTEYGGSDRRTKMALDDCKDLLQSAIQSLQLSIDMVHNNNVQAVHNQQADFKNWLSAVISYQQVCMEGFDDGKEGEKKIKDQLQTQNLDHVQKLTSITLDIVSNLSHILEQFGLKLDLKPASRRLLSKDGLPTWFSRADRKLLGRGWRANVEPNAVVAKDGSGQFKTVGEAIASYPNNHQGRFVIYVKAGIYEEYITVPQTAKNIFMYGDGPKKTIFTGSKNAKLDNFTVVQSATFANDADGFIGQAMTFQNTAGPKGEQAVAFRNQGDMSALVGCHILGYQDTLYVQTNRQFYRKCVISGTIDFIFGISSALIQNSNIIVRKPRDGQFNAITADGTSEKNMATGIVLQGCNIAAEDELLHIKFQVKSFLGRPWKNFSRTVVMESNIGDFVHPEGWAPWGTKNYDDTLYYAEYNNDGLGANVNGRIKWKGYHASISREEATQFTAAQFLKSGPVNGTNNGTDWLKGIPHYLDFAKP 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2319 572 SMART PMEI_2 38 197 IPR006501 GO:0004857
Aed2g2319 572 Gene3D - 244 562 IPR012334 -
Aed2g2319 572 Pfam Plant invertase/pectin methylesterase inhibitor 46 197 IPR006501 GO:0004857
Aed2g2319 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 202 IPR035513 -
Aed2g2319 572 SUPERFAMILY Pectin lyase-like 248 548 IPR011050 -
Aed2g2319 572 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Aed2g2319 572 PANTHER PECTINESTERASE 3 562 - -
Aed2g2319 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 203 IPR035513 -
Aed2g2319 572 PANTHER PECTINESTERASE 3 562 - -
Aed2g2319 572 TIGRFAM PME_inhib: pectinesterase inhibitor domain 29 201 IPR006501 GO:0004857
Aed2g2319 572 CDD PMEI-like_3 46 202 - -
Aed2g2319 572 Pfam Pectinesterase 250 546 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2319 Aed-Chr2 26537143 26538861 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2319 41 546 Carbohydrate Esterase AT2G26450 40.117 1.84e-127 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2319 K01051 - gmx:100781507 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2319 2 26537143 26538861 Aed8g1556 8 20821345 20823508 PCT
Aed8g1557 8 20825849 20828094 Aed2g2319 2 26537143 26538861 PCT