Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2315 ATGGGTGGTGCAACGTACTCTGTGGCCAAGATTTGTGTGTGGTGGGACATTGACAAGTGTCGTGTCCCCAAGGGCCAAGACCCGCACTCCATCGCTAAGAACATAACCTCCGCTCTTATGAACATCAAGTACGGCGGCCCAGTCACCATCTCCGCCTACGGCGACACCAACCGCATTCCCCCGCCACTGCAACACGCCCTCAACAGCACCGGCATTGCTCTCAACCACGTCCCCACCGGCGCCAAACACGCCAGCGACAAGAAGCTTCTAGTTGATATGCTGTTATGGGCCGTAGACAATCCCGCCCCCGCAAACTACTTGCTCATTTCCGGTGACACTGAGTTCTCCAACGCGCTTCACCAACTCAGCATGCGAAAGTACAACATTCTCCTCGCCCACCCCCCGCCGCATGTTTCTCCCTCCCTCGCTTCCGCCGCCAAAGTCGTCTGGCTCTGGACCACCCTCTCCGCCGCCGCCGCCCCTCTCTACATCCTCGACTCCGACTCCAACCCCGTTAAACCCACTCCCATTCCCACTCTTCAATACAAAACCAAACCTAAATACATCAAAAAAATAATCCCCACAATCGAGACTAAGAACAACGATGATGTTCGTATCCCTATTCTGGAACCTCCACAACCACAGAGAAAGTTCGCTCCTCATGAATTTTTTCCTCCTAAACATAACGTCCCCGTAATTCCATTTCCAATCCCTAATAAGTTGAATAATGAAATTTTAATTCCTCGTCGCGATTCACACCAAAACCCTTTGAGGCAACAGCTGCTAAATGAAAATCTTCACCGTACTACTAATCAAGAAACCACTGAGTACAATGTGGAGAATCTCGTTGATGTTATTATTGGAGCGCTGAACTTTCTCAAGGTTGAAATGATTATGCCCACTGAAGCCAATATAACTAATTGCATACGCTACGGGGATCCCAGCATGTTCTTAGGAGTAGGTGAATGTGTGTTGACGTCCCTTGAGGTGGAAGAAACAAATAGGAAGGAAAGATTGTGA 1020 0.4971 MGGATYSVAKICVWWDIDKCRVPKGQDPHSIAKNITSALMNIKYGGPVTISAYGDTNRIPPPLQHALNSTGIALNHVPTGAKHASDKKLLVDMLLWAVDNPAPANYLLISGDTEFSNALHQLSMRKYNILLAHPPPHVSPSLASAAKVVWLWTTLSAAAAPLYILDSDSNPVKPTPIPTLQYKTKPKYIKKIIPTIETKNNDDVRIPILEPPQPQRKFAPHEFFPPKHNVPVIPFPIPNKLNNEILIPRRDSHQNPLRQQLLNENLHRTTNQETTEYNVENLVDVIIGALNFLKVEMIMPTEANITNCIRYGDPSMFLGVGECVLTSLEVEETNRKERL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2315 339 CDD PIN_limkain_b1_N_like 10 134 - -
Aed2g2315 339 PANTHER ENDONUCLEASE OR GLYCOSYL HYDROLASE WITH C2H2-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED 5 165 - -
Aed2g2315 339 PANTHER ENDONUCLEASE OR GLYCOSYL HYDROLASE WITH C2H2-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED 205 316 - -
Aed2g2315 339 PANTHER LIMKAIN B LKAP 205 316 IPR024768 GO:0005777|GO:0010468|GO:1903231
Aed2g2315 339 Pfam NYN domain 10 147 IPR021139 GO:0004540
Aed2g2315 339 Gene3D - 10 154 - -
Aed2g2315 339 PANTHER LIMKAIN B LKAP 5 165 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2315 Aed-Chr2 26517887 26520252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2315 4 167 C2H2 Transcription Factor Family AT5G61190 63.415 1.39e-65 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2315 2 26517887 26520252 Aed2g2315 2 26517887 26520252 ECH