Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2313 AATCATTTCAATTCCAATCTACTTGAGTCAAAAGCTTGGACCGCTTTATCCTACGCCCTCCTCCCTGCTTATCCTGCGCATATTTCACCGAGATCTTCAACTACCACCTCTCCTCCGCGCTCTCACTTTCTCGACTACACAACATTCCTACTGAATTCCAGACTGATCTGTGACTGTTGGCTTCGATCGGAAAGAATCATGAGTTGTTTCAGCTGTTGTGAGGAAGATGACTACCAGAAGAATGCTGAAAGTGGAGGACAGCATGTGGTAAAAAGCTCAACGGGAAATGATGGAAACGGTCGTGCATCCGAAACTGCAAAGCAGGGCACTCAAGCTGTGAAAATTCAGCCCATTGAAGTTCCTGAATTACCAGTGGATGAACTCAAAGAAATTACAGATGACTTTGGAGAAAGTTCTTTGATTGGAGAGGGATCCTATGGAAGAGTATATTACGGTGTTCTGAAAAGTGAGCAGGGGGCAGCAATCAAGAAATTAGATGCCAGTAAACAGCCTGATGACGAATTTCTAGCCCAGGTTTCAATGGTTTCTCGGTTGAAGCATGACAATTTTGTTCAATTGCTTGGTTATTGCATTGATGGAAACTCCCGAATTCTTGCTTATGAGTTTGCATCTAATGGTTCTCTTCATGATATTTTACATGTAATTGATGTGTTTCAGGCTACACCAAGACTCAGTGAGGATAAAGTCAGACAGTGTGTAGATGCAAGACTAGGAGGAGATTACCCTCCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCCCTGTGTGTGCAATATGAAGCTGATTTCAGGCCAAACATGAGCATTGTAGTCAAAGCACTTCAACCTTTGTTGAACGCAAGACATGGGCCTGCTGGTGAAACTCCAAACTAA 894 0.4362 NHFNSNLLESKAWTALSYALLPAYPAHISPRSSTTTSPPRSHFLDYTTFLLNSRLICDCWLRSERIMSCFSCCEEDDYQKNAESGGQHVVKSSTGNDGNGRASETAKQGTQAVKIQPIEVPELPVDELKEITDDFGESSLIGEGSYGRVYYGVLKSEQGAAIKKLDASKQPDDEFLAQVSMVSRLKHDNFVQLLGYCIDGNSRILAYEFASNGSLHDILHVIDVFQATPRLSEDKVRQCVDARLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARHGPAGETPN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2313 297 Gene3D Transferase(Phosphotransferase) domain 1 207 291 - -
Aed2g2313 297 Gene3D Phosphorylase Kinase; domain 1 96 206 - -
Aed2g2313 297 ProSiteProfiles Protein kinase domain profile. 135 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2313 297 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 226 295 - -
Aed2g2313 297 Pfam Protein tyrosine and serine/threonine kinase 140 220 IPR001245 GO:0004672|GO:0006468
Aed2g2313 297 SUPERFAMILY Protein kinase-like (PK-like) 114 221 IPR011009 -
Aed2g2313 297 MobiDBLite consensus disorder prediction 83 111 - -
Aed2g2313 297 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 67 220 - -
Aed2g2313 297 SMART tyrkin_6 135 281 IPR020635 GO:0004713|GO:0006468
Aed2g2313 297 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Aed2g2313 297 MobiDBLite consensus disorder prediction 85 111 - -
Aed2g2313 297 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 67 220 - -
Aed2g2313 297 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 226 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2313 Aed-Chr2 26506521 26510248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2313 127 219 Receptor kinase-like Gene Family AT5G01950 51.064 3.00e-23 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Aed2g2313 PK_Tyr_Ser-Thr 1.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2313 K13436 - gmx:100813950 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2253 6 24627674 24633715 Aed2g2313 2 26506521 26510248 ECH
Aed2g2313 2 26506521 26510248 Aed2g2313 2 26506521 26510248 ECH
Aed2g2313 2 26506521 26510248 Aed8g1553 8 20809330 20813913 PCT